RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 IL5P05113 134 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 HKR1P10072 659 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 VDAC1P21796 283 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 RPL27AP46776 148 aaKnown RBP12.44□□□□□ -0.42
HPS4-216ENST00000493455 TATDN3Q17R31 274 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 SPINK9Q5DT21 86 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 GGNBP1Q5YKI7 109 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 MITD1Q8WV92 249 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 SRSF12Q8WXF0 261 aaKnown RBP12.44□□□□□ -0.42
HPS4-216ENST00000493455 C19orf24Q9BVV8 132 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 QTRT1Q9BXR0 403 aaKnown RBP12.44□□□□□ -0.42
HPS4-216ENST00000493455 FBXO7Q9Y3I1 522 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 C2CD3Q4AC94 2353 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 NF1P21359 2839 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 DBX1A6NMT0 343 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 C15orf61A6NNL5 157 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 G3V318 75 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 AP4M1O00189 453 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 SSNA1O43805 119 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 IFNA21P01568 189 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 SSBP2P81877 361 aaPredicted RBP12.43□□□□□ -0.42
HPS4-216ENST00000493455 OXA1LQ15070 435 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 THOC7Q6I9Y2 204 aaKnown RBP12.43□□□□□ -0.42
HPS4-216ENST00000493455 UNQ5815/PRO19632Q6UWF5 114 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 ZNF562Q6V9R5 426 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 FAM219AQ8IW50 185 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 LRTM2Q8N967 370 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 OR1S1Q8NH92 325 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 LINC01006Q8NI28 216 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 LSM10Q969L4 123 aaKnown RBP12.43□□□□□ -0.42
HPS4-216ENST00000493455 PDCD10Q9BUL8 212 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 PRNDQ9UKY0 176 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 ALG5Q9Y673 324 aa12.43□□□□□ -0.42
HPS4-216ENST00000493455 A0A0B4J293 547 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 C13orf42A0A1B0GVH6 325 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 DUXBA0A1W2PPF3 345 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 HMX3A6NHT5 357 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 MSGN1A6NI15 193 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 IFNA17P01571 189 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 IL6RP08887 468 aaPredicted RBP12.42□□□□□ -0.42
HPS4-216ENST00000493455 SULT1A3P0DMM9 295 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 SULT1A4P0DMN0 295 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 MAS1LP35410 378 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 COMPP49747 757 aaPredicted RBP12.42□□□□□ -0.42
HPS4-216ENST00000493455 Q6ZRM9 215 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 STPG2Q8N412 459 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 KLHDC1Q8N7A1 406 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 LFNGQ8NES3 379 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 C16orf95Q9H693 158 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 SERTAD4Q9NUC0 356 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 RNF114Q9Y508 228 aa12.42□□□□□ -0.42
HPS4-216ENST00000493455 TRAV41A0A0B4J266 112 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 PIGBOS1A0A0B4J2F0 54 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 TEX50A0A1B0GTY4 177 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 CLPSL1A2RUU4 121 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 GOSR2O14653 212 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 ST8SIA3O43173 380 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 P0C879 139 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 RIPPLY3P57055 190 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 SMCO1Q147U7 214 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 NMSQ5H8A3 153 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 CENPVQ7Z7K6 275 aaPredicted RBP12.41□□□□□ -0.42
HPS4-216ENST00000493455 ZNF329Q86UD4 541 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 Q8N2B8 174 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 MINDY2Q8NBR6 621 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 CHPT1Q8WUD6 406 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 TMEM158Q8WZ71 300 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 TMED3Q9Y3Q3 217 aa12.41□□□□□ -0.42
HPS4-216ENST00000493455 A0A1W2PN81 502 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 C5orf51A6NDU8 294 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 MPTX1A8MV57 137 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 SNRPGP15A8MWD9 76 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 E7EUB6 86 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 SCGB1D2O95969 90 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 REG1AP05451 166 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 CHRNA7P36544 502 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 FOXL1Q12952 345 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 HIST2H2BDQ6DRA6 164 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 C10orf99Q6UWK7 81 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 OR5T1Q8NG75 326 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 OR1L8Q8NGR8 309 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 SGMS2Q8NHU3 365 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.4□□□□□ -0.42
HPS4-216ENST00000493455 ZNF355PQ9NSJ1 428 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 FKBP11Q9NYL4 201 aa12.4□□□□□ -0.42
HPS4-216ENST00000493455 FOXA2Q9Y261 457 aaPredicted RBP12.4□□□□□ -0.42
HPS4-216ENST00000493455 PSMB11A5LHX3 300 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 SIX6O95475 246 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 TRAPPC2P0DI81 140 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 TRAPPC2BP0DI82 140 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 EGR2P11161 476 aaPredicted RBP12.39□□□□□ -0.43
HPS4-216ENST00000493455 HOXA1P49639 335 aaPredicted RBP12.39□□□□□ -0.43
HPS4-216ENST00000493455 TMEM267Q0VDI3 215 aaPredicted RBP12.39□□□□□ -0.43
HPS4-216ENST00000493455 C2orf68Q2NKX9 166 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 IAH1Q2TAA2 248 aaPredicted RBP12.39□□□□□ -0.43
HPS4-216ENST00000493455 C11orf44Q8N8P7 122 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 OR10W1Q8NGF6 305 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 SPIN2AQ99865 258 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 SPIN2BQ9BPZ2 258 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 TMEM14BQ9NUH8 114 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms