RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 ELANEP08246 267 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 AKAIN1P0CW23 69 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 F2RP25116 425 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 SLC6A1P30531 599 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 VDAC2P45880 294 aaPredicted RBP5.26□□□□□ -1.57
VPS52-219ENST00000493379 TAS2R31P59538 309 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 TSPAN5P62079 268 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 KLF9Q13886 244 aaPredicted RBP5.26□□□□□ -1.57
VPS52-219ENST00000493379 RTL8BQ17RB0 113 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 SPANXN2Q5MJ10 180 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 KCTD9Q7L273 389 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 CMTM1Q8IZ96 169 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 SLC38A6Q8IZM9 456 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 Q8N402 240 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 KLHDC1Q8N7A1 406 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 OR5AU1Q8NGC0 362 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 OR4S2Q8NH73 311 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 OR4A5Q8NH83 315 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 VSTM2AQ8TAG5 236 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 TMEM167AQ8TBQ9 72 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 SECTM1Q8WVN6 248 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 FXYD6Q9H0Q3 95 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 SLC25A32Q9H2D1 315 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 FBXL15Q9H469 300 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 ZFP57Q9NU63 452 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 BET1LQ9NYM9 111 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 KIAA1456Q9P272 454 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 DNAH7Q8WXX0 4024 aa5.26□□□□□ -1.57
VPS52-219ENST00000493379 SH2D7A6NKC9 451 aaPredicted RBP5.25□□□□□ -1.57
VPS52-219ENST00000493379 ARPC1BO15143 372 aaKnown RBP5.25□□□□□ -1.57
VPS52-219ENST00000493379 MPPED1O15442 326 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 FCGR3BO75015 233 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 OR2A4O95047 310 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 HRASP01112 189 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 IFNA6P05013 189 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 CTSDP07339 412 aaPredicted RBP5.25□□□□□ -1.57
VPS52-219ENST00000493379 PSMB8P28062 276 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 MAS1LP35410 378 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 CDX1P47902 265 aaPredicted RBP5.25□□□□□ -1.57
VPS52-219ENST00000493379 AP3S2P59780 193 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 HERV-K104P61576 105 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 NDPQ00604 133 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 CATR1Q13166 79 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 FOXE3Q13461 319 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 BAK1Q16611 211 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 PRSS8Q16651 343 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 CNPY1Q3B7I2 92 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 VMA21Q3ZAQ7 101 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 TEX38Q6PEX7 206 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 CENPVQ7Z7K6 275 aaPredicted RBP5.25□□□□□ -1.57
VPS52-219ENST00000493379 NDUFA11Q86Y39 141 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 FOXRED2Q8IWF2 684 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 SPAG16Q8N0X2 631 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 WFDC9Q8NEX5 89 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 OR4C16Q8NGL9 310 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 OR13C8Q8NGS7 320 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 ZFAND1Q8TCF1 268 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 HARBI1Q96MB7 349 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 OR2A7Q96R45 310 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 PRRT1Q99946 306 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 RTBDNQ9BSG5 229 aaPredicted RBP5.25□□□□□ -1.57
VPS52-219ENST00000493379 AKIP1Q9NQ31 210 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 SLC2A9Q9NRM0 540 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 COMMD9Q9P000 198 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 METTL1Q9UBP6 276 aaKnown RBP5.25□□□□□ -1.57
VPS52-219ENST00000493379 FBXO7Q9Y3I1 522 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 TNCP24821 2201 aa5.25□□□□□ -1.57
VPS52-219ENST00000493379 PSMB11A5LHX3 300 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 DISC1C4P0D8 188 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 H3BUA1 57 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 J3QRK9 145 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 ATP6V0E1O15342 81 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 SLC25A17O43808 307 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 RAMP3O60896 148 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 CDS2O95674 445 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 CRYZL1O95825 349 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 IGKV1-39P01597 117 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 IGKV1D-39P04432 117 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 P0C879 139 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 SAA1P0DJI8 122 aaPredicted RBP5.24□□□□□ -1.57
VPS52-219ENST00000493379 CD28P10747 220 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 RPA2P15927 270 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 NQO2P16083 231 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 FXYD4P59646 89 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 SLC35B1P78383 322 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 RUNX1Q01196 453 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 DHODHQ02127 395 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 TMEM267Q0VDI3 215 aaPredicted RBP5.24□□□□□ -1.57
VPS52-219ENST00000493379 PJVKQ0ZLH3 352 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 CBX3Q13185 183 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 FXYD3Q14802 87 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 AARDQ4LEZ3 155 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 MMD2Q8IY49 270 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 TOMM5Q8N4H5 51 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 OR51S1Q8NGJ8 323 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 TCTEX1D2Q8WW35 142 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 GALNT14Q96FL9 552 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 SEC22AQ96IW7 307 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 NOL4LQ96MY1 436 aaPredicted RBP5.24□□□□□ -1.57
VPS52-219ENST00000493379 SLC25A21Q9BQT8 299 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms