RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 CRYGBP07316 175 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 ZNF735P0CB33 412 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 IL7P13232 177 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 TPPP2P59282 170 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 KRTAP10-3P60369 221 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 RPL23AP62750 156 aaKnown RBP6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 SRPXP78539 464 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 CD83Q01151 205 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 PJVKQ0ZLH3 352 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 BAK1Q16611 211 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 THOC7Q6I9Y2 204 aaKnown RBP6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 MZT2BQ6NZ67 158 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 PUSL1Q8N0Z8 303 aaKnown RBP6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 CENPSQ8N2Z9 138 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 OR5T1Q8NG75 326 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 MRGPRFQ96AM1 343 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 TMEM56Q96MV1 263 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 MS4A10Q96PG2 267 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 ENY2Q9NPA8 101 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 GPR132Q9UNW8 380 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 VSIG4Q9Y279 399 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 OR51B2Q9Y5P1 312 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 NUBP2Q9Y5Y2 271 aa6.39□□□□□ -1.39
TM4SF1-204ENST00000493348 CRYM-AS1A6NIL9 109 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 H3BUA1 57 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 ARPC1BO15143 372 aaKnown RBP6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 RPLP1P05386 114 aaKnown RBP6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 OR5AC1P0C628 307 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 OR9G9P0C7N8 305 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 TRAPPC2P0DI81 140 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 TRAPPC2BP0DI82 140 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 APELAP0DMC3 54 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 CD33P20138 364 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 VAMP1P23763 118 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 RAB9AP51151 201 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 CRIP2P52943 208 aaPredicted RBP6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 DEFA1P59665 94 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 DEFA3P59666 94 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 NDPQ00604 133 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 POU2AF1Q16633 256 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 SP6Q3SY56 376 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 C10orf99Q6UWK7 81 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 HSD17B13Q7Z5P4 300 aaPredicted RBP6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 MINDY2Q8NBR6 621 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 OR1L8Q8NGR8 309 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 DPF1Q92782 380 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 RBPMSQ93062 196 aaKnown RBP6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 TP53RKQ96S44 253 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 QTRT1Q9BXR0 403 aaKnown RBP6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 C5orf66Q9H5L9 145 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 THYN1Q9P016 225 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 CACFD1Q9UGQ2 172 aa6.38□□□□□ -1.39
TM4SF1-204ENST00000493348 FAM240BA0A1B0GVZ2 78 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 LYRM1O43325 122 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 IFNA17P01571 189 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 FGF2P09038 288 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 HIST1H1BP16401 226 aaKnown RBP6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 PSMB8P28062 276 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 CDX1P47902 265 aaPredicted RBP6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 BRWD1-AS2P59051 145 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 ZNF585BQ52M93 769 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 TMEM128Q5BJH2 165 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 PRR31Q5SQ13 230 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 TMEM268Q5VZI3 342 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 FAM219AQ8IW50 185 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 LGI3Q8N145 548 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 SLC35G3Q8N808 338 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 OR5B3Q8NH48 314 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 ENKURQ8TC29 256 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 UBE2E2Q96LR5 201 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 RTBDNQ9BSG5 229 aaPredicted RBP6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 TMEM222Q9H0R3 208 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 AKIP1Q9NQ31 210 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 FBXO7Q9Y3I1 522 aa6.37□□□□□ -1.39
TM4SF1-204ENST00000493348 HMX3A6NHT5 357 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 C15orf61A6NNL5 157 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 WIPF1O43516 503 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 IGLV1-40P01703 118 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 UCP1P25874 307 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 PPIFP30405 207 aaKnown RBP6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 HOXA1P49639 335 aaPredicted RBP6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 CCR6P51684 374 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 SUB1P53999 127 aaKnown RBP eCLIP6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 OR2B8PP59922 312 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 UBE2MP61081 183 aaKnown RBP6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 ERHP84090 104 aaKnown RBP6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 CFHR3Q02985 330 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 C4orf46Q504U0 113 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 FAM209BQ5JX69 171 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 C10orf55Q5SWW7 151 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 HIST2H2BDQ6DRA6 164 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 LCNL1Q6ZST4 164 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 C8orf86Q6ZUL3 223 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 CADM3Q8N126 398 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 TTC9CQ8N5M4 171 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 ADAD2Q8NCV1 583 aaKnown RBP6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 OR1L6Q8NGR2 347 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 COQ8AQ8NI60 647 aa6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 WIPF2Q8TF74 440 aaPredicted RBP6.36□□□□□ -1.39
TM4SF1-204ENST00000493348 CASTOR1Q8WTX7 329 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms