RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602		H0YJW9	148 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	SOCS1	O15524	211 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	FABP7	O15540	132 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	MRPS14	O60783	128 aa	Known RBP	3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	NDUFA3	O95167	84 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	NAPSA	O96009	420 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	LALBA	P00709	142 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	HRAS	P01112	189 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	GNAO1	P09471	354 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	CT45A6	P0DMU7	189 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	CT45A5	P0DMU8	189 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	CT45A7	P0DMV0	189 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	RAB3B	P20337	219 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	RAB6A	P20340	208 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	GAL	P22466	123 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	GNG2	P59768	71 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	HLA-DRB3	P79483	266 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	TMEM187	Q14656	261 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	RPL39P5	Q59GN2	51 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	SIGIRR	Q6IA17	410 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	OR10K2	Q6IF99	312 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	BTNL8	Q6UX41	500 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	LRRTM1	Q86UE6	522 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	TPRA1	Q86W33	373 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	C15orf53	Q8NAA6	179 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602		Q8NAQ8	132 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	DRAXIN	Q8NBI3	349 aa	Predicted RBP	3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	UXS1	Q8NBZ7	420 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	ZNF485	Q8NCK3	441 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	TSPAN14	Q8NG11	270 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	OR10R2	Q8NGX6	335 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	OSR1	Q8TAX0	266 aa	Predicted RBP	3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	CD300LF	Q8TDQ1	290 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	DEFB104A	Q8WTQ1	72 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	FCGR1B	Q92637	280 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	ARHGAP5-AS1	Q96IT6	56 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	ABHD14B	Q96IU4	210 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	HARBI1	Q96MB7	349 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	NICN1	Q9BSH3	213 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	PECR	Q9BY49	303 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	YTHDF1	Q9BYJ9	559 aa	Known RBP	3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	C6orf62	Q9GZU0	229 aa	Predicted RBP	3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	DCSTAMP	Q9H295	470 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	KCNK15	Q9H427	330 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602		Q9N2K0	584 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	VCX3A	Q9NNX9	186 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	DIABLO	Q9NR28	239 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	AK6	Q9Y3D8	172 aa	Known RBP	3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	SMIM31	A0A1B0GVY4	71 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	FAM223B	A6NKX1	122 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	IFITM5	A6NNB3	132 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	TMEM127	O75204	238 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	S1PR2	O95136	353 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	HIST1H1B	P16401	226 aa	Known RBP	3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	DTYMK	P23919	212 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	MAS1L	P35410	378 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	DLK1	P80370	383 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	TNXA	Q16473	311 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	C12orf74	Q32Q52	190 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	ODF3L2	Q3SX64	289 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	CDNF	Q49AH0	187 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	HES5	Q5TA89	166 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	ZNF880	Q6PDB4	577 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	GLDN	Q6ZMI3	551 aa	Predicted RBP	3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	CROCCP3	Q8IVE0	287 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	FAM223A	Q8IWN6	122 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	ODF3L1	Q8IXM7	274 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	MMD2	Q8IY49	270 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	NECAP1	Q8NC96	275 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	ADAD2	Q8NCV1	583 aa	Known RBP	3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	ACOT12	Q8WYK0	555 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	HSD17B10	Q99714	261 aa	Known RBP	3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	SRSF8	Q9BRL6	282 aa	Known RBP	3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	LPAR5	Q9H1C0	372 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	OR2D2	Q9H210	308 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	FKBP14	Q9NWM8	211 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	NACA	E9PAV3	2078 aa		3.85	□□□□□ -1.79
SEC13-219	ENST00000492602	ELOA3C	A0A087WX78	387 aa	Predicted RBP	3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	TRAV25	A0A0B4J276	109 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	ZNF320	A2RRD8	509 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	NOTO	A8MTQ0	251 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602		F8W735	103 aa	Predicted RBP	3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	GGCT	O75223	188 aa	Known RBP	3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	CRYZL1	O95825	349 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	CA1	P00915	261 aa	Predicted RBP	3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	CA2	P00918	260 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	IFNA5	P01569	189 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	HLA-A	P01891	365 aa	Known RBP	3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	IGKV1-16	P04430	117 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	OR9G9	P0C7N8	305 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	HIST1H1D	P16402	221 aa	Known RBP	3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	GNB3	P16520	340 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	BTF3	P20290	206 aa	Known RBP	3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	CBX5	P45973	191 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	CMC4	P56277	68 aa	Predicted RBP	3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	KRTAP10-1	P60331	282 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	UBE2K	P61086	200 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	ERVK-16	P61578	105 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	QRFP	P83859	136 aa		3.84	□□□□□ -1.79
SEC13-219	ENST00000492602	CATR1	Q13166	79 aa		3.84	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms