RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 NPFFR1Q9GZQ6 430 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 FRRS1LQ9P0K9 344 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 MRM2Q9UI43 246 aaKnown RBP10.59□□□□□ -0.71
HDAC3-213ENST00000492506 DHDHQ9UQ10 334 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 DYNC2H1Q8NCM8 4307 aaKnown RBP10.59□□□□□ -0.71
HDAC3-213ENST00000492506 HSD17B6O14756 317 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 BPNT1O95861 308 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 MBPP02686 304 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-213ENST00000492506 OR13C7P0DN81 318 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 FAM3BP58499 235 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-213ENST00000492506 TAS2R46P59540 309 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 SELENOTP62341 195 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 IL13RA2Q14627 380 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 ARL6IP1Q15041 203 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 SGPP2Q8IWX5 399 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 ABHD5Q8WTS1 349 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 RNF166Q96A37 237 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-213ENST00000492506 FGGYQ96C11 551 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 WWC2-AS2Q96NR7 200 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 GAFA1Q96PS6 74 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 WNT10AQ9GZT5 417 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 LYRM2Q9NU23 88 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-213ENST00000492506 RYR2Q92736 4967 aa10.58□□□□□ -0.72
HDAC3-213ENST00000492506 WI2-2373I1.2A0A1W2PRP0 233 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 CDIPTO14735 213 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 RENP00797 406 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 HLA-DQA2P01906 255 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 GYPBP06028 91 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 NPSP0C0P6 89 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 IGFBP3P17936 291 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-213ENST00000492506 KRTAP10-11P60412 298 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 RBX1P62877 108 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 LINC01590Q5TEZ4 76 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 LIAT1Q6ZQX7 453 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 FOXRED2Q8IWF2 684 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 OR6K6Q8NGW6 343 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 ZNRF4Q8WWF5 429 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 PYGO2Q9BRQ0 406 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 MIEN1Q9BRT3 115 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 ATG101Q9BSB4 218 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 SLC25A10Q9UBX3 287 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-213ENST00000492506 IKZF2Q9UKS7 526 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 C14orf166Q9Y224 244 aaKnown RBP10.57□□□□□ -0.72
HDAC3-213ENST00000492506 DNAH7Q8WXX0 4024 aa10.57□□□□□ -0.72
HDAC3-213ENST00000492506 EPPK1P58107 5090 aaKnown RBP10.56□□□□□ -0.72
HDAC3-213ENST00000492506 DSCAML1Q8TD84 2053 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 TGIF2-C20orf24A0A0A6YYL0 155 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 TRAV39A0A0B4J263 110 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 C20orf202A1L168 122 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 ANKRD30BLA7E2S9 258 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 MMP23AO75900 390 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 IL6RP08887 468 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-213ENST00000492506 MTCP1P56278 107 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 ERVFRD-1P60508 538 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 EIF2B1Q14232 305 aaKnown RBP10.56□□□□□ -0.72
HDAC3-213ENST00000492506 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 MRPL41Q8IXM3 137 aaKnown RBP10.56□□□□□ -0.72
HDAC3-213ENST00000492506 ADAD2Q8NCV1 583 aaKnown RBP10.56□□□□□ -0.72
HDAC3-213ENST00000492506 TMEM170AQ8WVE7 144 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 GNPNAT1Q96EK6 184 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-213ENST00000492506 ABHD14BQ96IU4 210 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 P2RX4Q99571 388 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 ELL3Q9HB65 397 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-213ENST00000492506 ZNF391Q9UJN7 358 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 WSB1Q9Y6I7 421 aa10.56□□□□□ -0.72
HDAC3-213ENST00000492506 TRAV1-1A0A0B4J248 108 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 XRCC2O43543 280 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 ANGPTL7O43827 346 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 SCAF4O95104 1147 aaKnown RBP10.55□□□□□ -0.72
HDAC3-213ENST00000492506 ZNF823P16415 610 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 CD33P20138 364 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 BRS3P32247 399 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 HRH1P35367 487 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 TMEM183BQ1AE95 376 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 ODF4Q2M2E3 257 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 PDZD11Q5EBL8 140 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 Q6ZS46 218 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 MKXQ8IYA7 352 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 C11orf42Q8N5U0 333 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 OR5D13Q8NGL4 314 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 MARCH1Q8TCQ1 289 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 MRGPRFQ96AM1 343 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 SNX22Q96L94 193 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 NKX3-1Q99801 234 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-213ENST00000492506 TTTY10Q9BZA0 68 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 FKBP11Q9NYL4 201 aa10.55□□□□□ -0.72
HDAC3-213ENST00000492506 A0A1B0GU03 582 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 hCG_38984A0A1B0GV85 526 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 XKRY2A2RUG3 117 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 NKX6-3A6NJ46 265 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 ALOX5APP20292 161 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 HSD11B1P28845 292 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 IAH1Q2TAA2 248 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-213ENST00000492506 DEFB121Q5J5C9 76 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 KCTD18Q6PI47 426 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-213ENST00000492506 CATSPERDQ86XM0 798 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 FAM219AQ8IW50 185 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 FAM185AQ8N0U4 392 aa10.54□□□□□ -0.72
HDAC3-213ENST00000492506 DYNAPQ8N1N2 210 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms