RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CBX5P45973 191 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 OR2B11Q5JQS5 317 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 IDNKQ5T6J7 187 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 ZNF818PQ6ZRF7 136 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 C19orf35Q6ZS72 473 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 CROCCP3Q8IVE0 287 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 SPAG16Q8N0X2 631 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 CD300LFQ8TDQ1 290 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 ATP6V0BQ99437 205 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 HIPK2Q9H2X6 1198 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 DIABLOQ9NR28 239 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 DNAH1Q9P2D7 4330 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 TRAV3A0A0B4J244 114 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 HLA-AP01891 365 aaKnown RBP6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 CD7P09564 240 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 MYOD1P15172 320 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 NQO2P16083 231 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 EDN2P20800 178 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 PTBP1P26599 531 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 ARPC4P59998 168 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 MXD1Q05195 221 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 LYSMD2Q8IV50 215 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 ZNF502Q8TBZ5 544 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 SECTM1Q8WVN6 248 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 EEF1AKMT3Q96AZ1 226 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 ISOC1Q96CN7 298 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 YIPF6Q96EC8 236 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 CXorf58Q96LI9 332 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 NEURL2Q9BR09 285 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 SLC5A7Q9GZV3 580 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 SLC2A8Q9NY64 477 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 COMMD9Q9P000 198 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
SMARCB1-207ENST00000491967 LOC100506127A0A0U1RQW1 187 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 MFSD2BA6NFX1 497 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 SULT1C2O00338 296 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 TNFSF12O43508 249 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 PGLYRP1O75594 196 aaPredicted RBP6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 CLEC3BP05452 202 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 ARL3P36405 182 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 RPS19P39019 145 aaKnown RBP6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 ELLP55199 621 aaPredicted RBP6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 CD81P60033 236 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 CATR1Q13166 79 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 NEDD8Q15843 81 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 FAM106AQ4KMX7 169 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 ZNF585BQ52M93 769 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 THOC7Q6I9Y2 204 aaKnown RBP6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 CLEC19AQ6UXS0 136 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 SSX9Q7RTT3 188 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 HSD17B13Q7Z5P4 300 aaPredicted RBP6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 TMEM61Q8N0U2 210 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 VN1R17PQ8TDU5 208 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 BORCS5Q969J3 196 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 MOB3AQ96BX8 217 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 S100A16Q96FQ6 103 aaKnown RBP6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 QTRT1Q9BXR0 403 aaKnown RBP6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 ZNF436Q9C0F3 470 aaPredicted RBP6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 TUBA4BQ9H853 241 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 FAM212BQ9NTI7 297 aaPredicted RBP6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 TMEM140Q9NV12 185 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 MLXQ9UH92 298 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 CEPT1Q9Y6K0 416 aa6.28□□□□□ -1.4
SMARCB1-207ENST00000491967 EPPK1P58107 5090 aaKnown RBP6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 TRAV25A0A0B4J276 109 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 TEX50A0A1B0GTY4 177 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 DPPA5A6NC42 116 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 OR11H12B2RN74 326 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 F8W735 103 aaPredicted RBP6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 TPPPO94811 219 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 S1PR2O95136 353 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 IFNA6P05013 189 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 SERPINE2P07093 398 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 F2RP25116 425 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 TGFBR1P36897 503 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 RFX2P48378 723 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 WT1-ASQ06250 92 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 UBE2NLQ5JXB2 153 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 ZNF57Q68EA5 555 aaPredicted RBP6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 UNQ9165/PRO28630Q6UXU0 137 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 DEFB125Q8N687 156 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 GDPD1Q8N9F7 314 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 UXS1Q8NBZ7 420 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 OR10W1Q8NGF6 305 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 MARC2Q969Z3 335 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 WDR89Q96FK6 387 aaPredicted RBP6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 ZNF414Q96IQ9 312 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 CMTM3Q96MX0 182 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 PLEKHA3Q9HB20 300 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 HRASLSQ9HDD0 168 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 NDUFA4L2Q9NRX3 87 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 MRPL27Q9P0M9 148 aaKnown RBP6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 STARD9Q9P2P6 4700 aa6.27□□□□□ -1.41
SMARCB1-207ENST00000491967 MARCH11A6NNE9 402 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 IGHV3-23P01764 117 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 REG1AP05451 166 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 DEFA4P12838 97 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 MFAP2P55001 183 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 TAS2R46P59540 309 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 TAS2R20P59543 309 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms