RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 GLYATL2Q8WU03 294 aa11.74□□□□□ -0.53
CDC42SE1-205ENST00000491825 RCC1LQ96I51 464 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-205ENST00000491825 SEC22AQ96IW7 307 aa11.74□□□□□ -0.53
CDC42SE1-205ENST00000491825 CLCC1Q96S66 551 aa11.74□□□□□ -0.53
CDC42SE1-205ENST00000491825 FBXO7Q9Y3I1 522 aa11.74□□□□□ -0.53
CDC42SE1-205ENST00000491825 ATG12O94817 140 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 CDS2O95674 445 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 KRASP01116 189 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 AKR1C4P17516 323 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 PPIFP30405 207 aaKnown RBP11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 KRTAP10-11P60412 298 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 IFITM3Q01628 133 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 FXYD3Q14802 87 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 AKIRIN2Q53H80 203 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 TMED4Q7Z7H5 227 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 SLC25A42Q86VD7 318 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 LINC00482Q8N8I6 264 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 IL22RA2Q969J5 263 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 TMEM56Q96MV1 263 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 KCNIP3Q9Y2W7 256 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 TMEM56-RWDD3S4R434 201 aa11.73□□□□□ -0.53
CDC42SE1-205ENST00000491825 TRAV41A0A0B4J266 112 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 UPK2O00526 184 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 ACTL6BO94805 426 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 CNIH1O95406 144 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 IGHG4P01861 327 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 ANXA3P12429 323 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 HLA-GP17693 338 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 G6PCP35575 357 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 GNB1P62873 340 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 SRPXP78539 464 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 EGFEM1PQ0D2K5 195 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 TMEM267Q0VDI3 215 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 TNXAQ16473 311 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 TRIM16LQ309B1 348 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 SP6Q3SY56 376 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 MZT2BQ6NZ67 158 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 RNF152Q8N8N0 203 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 MINDY2Q8NBR6 621 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 SRSF12Q8WXF0 261 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 TMEM68Q96MH6 324 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 TSC22D3Q99576 134 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 C20orf85Q9H1P6 137 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 LINC00527Q9UJ94 153 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 NUBP2Q9Y5Y2 271 aa11.72□□□□□ -0.53
CDC42SE1-205ENST00000491825 PIGBOS1A0A0B4J2F0 54 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 DUS4LO95620 317 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 IGKV1-5P01602 117 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 P0C879 139 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 TMEM187Q14656 261 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 KHDC1LQ5JSQ8 128 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 TEX38Q6PEX7 206 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 GRPEL2Q8TAA5 225 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 LHFPL5Q8TAF8 219 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 ABHD5Q8WTS1 349 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 RBPMSQ93062 196 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 SPIN2AQ99865 258 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 SPIN2BQ9BPZ2 258 aa11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 FAM103A1Q9BTL3 118 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-205ENST00000491825 C15orf61A6NNL5 157 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 G3V318 75 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 IGLV1-40P01703 118 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 TCRBP04435 133 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 ELANEP08246 267 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 PSMB8P28062 276 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 AKR1C2P52895 323 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 FOXE3Q13461 319 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 PPP1R1AQ13522 171 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 ECSCRQ19T08 205 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 THOC7Q6I9Y2 204 aaKnown RBP11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 H2BFWTQ7Z2G1 175 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 ZNF329Q86UD4 541 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 FAM219AQ8IW50 185 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 MRPL41Q8IXM3 137 aaKnown RBP11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 OR5M8Q8NGP6 311 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 SRSF8Q9BRL6 282 aaKnown RBP11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 ALX4Q9H161 411 aaPredicted RBP11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 TMEM14BQ9NUH8 114 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 PRNDQ9UKY0 176 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 FOXA2Q9Y261 457 aaPredicted RBP11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 RYR3Q15413 4870 aa11.7□□□□□ -0.54
CDC42SE1-205ENST00000491825 TRAV3A0A0B4J244 114 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 FAM240BA0A1B0GVZ2 78 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 WI2-2373I1.2A0A1W2PRP0 233 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 TEX22C9J3V5 150 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 SNAPC5O75971 98 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 BRI3O95415 125 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 SFT2D2O95562 160 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 OR9G9P0C7N8 305 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 VAMP1P23763 118 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 RPL27AP46776 148 aaKnown RBP11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 MECP2P51608 486 aaKnown RBP11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 DEFA1P59665 94 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 DEFA3P59666 94 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 RPL23AP62750 156 aaKnown RBP11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 C10orf55Q5SWW7 151 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 ASPHD1Q5U4P2 390 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 TMEM268Q5VZI3 342 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 C18orf65Q6ZTR6 163 aa11.69□□□□□ -0.54
CDC42SE1-205ENST00000491825 ZNF695Q8IW36 515 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms