RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 MS4A15Q8N5U1 240 aa9.75□□□□□ -0.85
USF1-206ENST00000491629 FBLIM1Q8WUP2 373 aa9.75□□□□□ -0.85
USF1-206ENST00000491629 ADTRPQ96IZ2 230 aa9.75□□□□□ -0.85
USF1-206ENST00000491629 SLC2A9Q9NRM0 540 aa9.75□□□□□ -0.85
USF1-206ENST00000491629 PLCXD1Q9NUJ7 323 aa9.75□□□□□ -0.85
USF1-206ENST00000491629 AK6Q9Y3D8 172 aaKnown RBP9.75□□□□□ -0.85
USF1-206ENST00000491629 IGHV3-35A0A0C4DH35 117 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 TMEM272A0A1B0GTI8 110 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 FCGR3BO75015 233 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 DIRAS3O95661 229 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 CTRB1P17538 263 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 APOC4P55056 127 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 NANOS2P60321 138 aaKnown RBP9.74□□□□□ -0.85
USF1-206ENST00000491629 TPBGQ13641 420 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 C2orf76Q3KRA6 126 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 OR2B11Q5JQS5 317 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 CTRB2Q6GPI1 263 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 AKAP14Q86UN6 197 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 SLC25A42Q86VD7 318 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 PUSL1Q8N0Z8 303 aaKnown RBP9.74□□□□□ -0.85
USF1-206ENST00000491629 OR2C3Q8N628 320 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 FYTTD1Q96QD9 318 aaKnown RBP9.74□□□□□ -0.85
USF1-206ENST00000491629 AGRNO00468 2067 aa9.74□□□□□ -0.85
USF1-206ENST00000491629 IGLV11-55A0A075B6I3 123 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 KIR2DL5BA0A0G2JN68 375 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 KIR2DL5BA0A0G2JPC4 375 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 A0A1B0GVY2 172 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 J3QRK9 145 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 UBE2CO00762 179 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 ACTL6BO94805 426 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 KBTBD11O94819 623 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 REG1AP05451 166 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 CLEC3BP05452 202 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 RPL35AP18077 110 aaKnown RBP9.73□□□□□ -0.85
USF1-206ENST00000491629 PSMB6P28072 239 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 RCVRNP35243 200 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 RPL27AP46776 148 aaKnown RBP9.73□□□□□ -0.85
USF1-206ENST00000491629 EIF4EBP1Q13541 118 aaPredicted RBP9.73□□□□□ -0.85
USF1-206ENST00000491629 KIR2DL5AQ8N109 375 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 OR56B1Q8NGI3 324 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 OR13F1Q8NGS4 319 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 KIR2DL5BQ8NHK3 375 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 FAM3DQ96BQ1 224 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 DCUN1D5Q9BTE7 237 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 OR51E2Q9H255 320 aa9.73□□□□□ -0.85
USF1-206ENST00000491629 ELF5Q9UKW6 265 aaPredicted RBP9.73□□□□□ -0.85
USF1-206ENST00000491629 IGKV1D-13A0A0B4J2D9 117 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 MFNGO00587 321 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 TSPAN4O14817 238 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 IGKV1-13P0DP09 117 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 GNB3P16520 340 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 RAB11BQ15907 218 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 ZNF124Q15973 351 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 OR4A47Q6IF82 309 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 RBPMS2Q6ZRY4 209 aaKnown RBP9.72□□□□□ -0.85
USF1-206ENST00000491629 BPIFB6Q8NFQ5 453 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 TMEM167AQ8TBQ9 72 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 ZNF502Q8TBZ5 544 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 TMEM203Q969S6 136 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 EEF1AKMT3Q96AZ1 226 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 SPAG8Q99932 426 aaPredicted RBP9.72□□□□□ -0.85
USF1-206ENST00000491629 ZNF436Q9C0F3 470 aaPredicted RBP9.72□□□□□ -0.85
USF1-206ENST00000491629 C5orf66Q9H5L9 145 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 MAP6D1Q9H9H5 199 aa9.72□□□□□ -0.85
USF1-206ENST00000491629 MRPL27Q9P0M9 148 aaKnown RBP9.72□□□□□ -0.85
USF1-206ENST00000491629 RBM7Q9Y580 266 aaKnown RBP9.72□□□□□ -0.85
USF1-206ENST00000491629 RAB27BO00194 218 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 CREBL2O60519 120 aaPredicted RBP9.71□□□□□ -0.86
USF1-206ENST00000491629 GALP22466 123 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 GPR183P32249 361 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 RPS25P62851 125 aaKnown RBP9.71□□□□□ -0.86
USF1-206ENST00000491629 CD300CQ08708 224 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 LIPKQ5VXJ0 399 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 Q6ZS49 121 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 DHRSXQ8N5I4 330 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 ZNF645Q8N7E2 425 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 STPG3Q8N7X2 389 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 MARC2Q969Z3 335 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 RAB3CQ96E17 227 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 ZNF414Q96IQ9 312 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 OR2A7Q96R45 310 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 GPHA2Q96T91 129 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 GINS4Q9BRT9 223 aa9.71□□□□□ -0.86
USF1-206ENST00000491629 RBMX2Q9Y388 322 aaKnown RBP9.71□□□□□ -0.86
USF1-206ENST00000491629 A0A075B6Q4 140 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 TRBV7-1A0A0A6YYK4 115 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 FAM25EA8MYX2 175 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 FAM25AB3EWG3 89 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 FAM25CB3EWG5 89 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 FAM25GB3EWG6 89 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 HLA-DQB1P01920 261 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 ELLP55199 621 aaPredicted RBP9.7□□□□□ -0.86
USF1-206ENST00000491629 ARFRP1Q13795 201 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 SPHARQ15513 63 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 HES5Q5TA89 166 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 GPR107Q5VW38 600 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 KCTD9Q7L273 389 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 APRG1Q8IVJ8 170 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 SLC38A6Q8IZM9 456 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 OR10R2Q8NGX6 335 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms