RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TSPAN5P62079 268 aa12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 HSD17B13Q7Z5P4 300 aaPredicted RBP12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 SRSF8Q9BRL6 282 aaKnown RBP12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 NAA50Q9GZZ1 169 aaKnown RBP12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 PLEKHA2Q9HB19 425 aa12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 CCDC59Q9P031 241 aaKnown RBP12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 PRKDCP78527 4128 aaKnown RBP12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 C3orf84H3BNL1 204 aa12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 SNAPC5O75971 98 aa12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 FCER2P06734 321 aa12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 PTHLHP12272 177 aa12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 PSMB6P28072 239 aa12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 OR4A47Q6IF82 309 aa12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 CLVS1Q8IUQ0 354 aaPredicted RBP12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 OR51H1Q8NH63 302 aa12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 ZNF2Q9BSG1 426 aaPredicted RBP12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 SLC2A8Q9NY64 477 aa12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 COMMD9Q9P000 198 aa12.67□□□□□ -0.38
PDLIM2-217ENST00000491330 TRBV7-1A0A0A6YYK4 115 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 MEIS3P1A6NDR6 274 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 HMX3A6NHT5 357 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 PRH1P02810 166 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 ZNF735P0CB33 412 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 GNRHRP30968 328 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 HRH1P35367 487 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 RFX2P48378 723 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 UCP3P55916 312 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 C10orf55Q5SWW7 151 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 SBSPONQ8IVN8 264 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 ARRDC1Q8N5I2 433 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 RCHY1Q96PM5 261 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 FKBP11Q9NYL4 201 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 TECRQ9NZ01 308 aaKnown RBP12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 EXTL2Q9UBQ6 330 aa12.66□□□□□ -0.38
PDLIM2-217ENST00000491330 GPR31O00270 319 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 IFNA6P05013 189 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 CRYGCP07315 174 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 IGHV4-30-4P0DP06 118 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 ARL3P36405 182 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 DEFA5Q01523 94 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 MRGPRG-AS1Q2M3A8 158 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 ZNF818PQ6ZRF7 136 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 SNX29P2Q8IUI4 249 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 LYSMD2Q8IV50 215 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 LAX1Q8IWV1 398 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 TSC22D3Q99576 134 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 PALMDQ9NP74 551 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 MTFP1Q9UDX5 166 aa12.65□□□□□ -0.38
PDLIM2-217ENST00000491330 A8MZ25 164 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 TEX22C9J3V5 150 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 UPK2O00526 184 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 RGS5O15539 181 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 PMP2P02689 132 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 CSN3P07498 182 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 IL6RP08887 468 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 F2RP25116 425 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 HAPLN4Q86UW8 402 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 SLC38A6Q8IZM9 456 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 OR1L6Q8NGR2 347 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 FCAMRQ8WWV6 532 aa12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 ZNF486Q96H40 463 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 QTRT1Q9BXR0 403 aaKnown RBP12.64□□□□□ -0.39
PDLIM2-217ENST00000491330 ZNF320A2RRD8 509 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 GABARAPH6UMI1 98 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 BMPR1BO00238 502 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 CTDSPLO15194 276 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 TRBV12-3P01733 135 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 TRAPPC2P0DI81 140 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 TRAPPC2BP0DI82 140 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 HLA-DMAP28067 261 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 BRWD1-AS2P59051 145 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 ZNF45Q02386 682 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 RNASE10Q5GAN6 216 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 GPHB5Q86YW7 130 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 DYNC2LI1Q8TCX1 351 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 TMEM56Q96MV1 263 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 TMEM140Q9NV12 185 aa12.63□□□□□ -0.39
PDLIM2-217ENST00000491330 LGALS9O00182 355 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 PGLYRP1O75594 196 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 OR2C1O95371 312 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 RLN1P04808 185 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 CTRB1P17538 263 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 TAS2R19P59542 299 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 SPCS2Q15005 226 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 ANKRD55Q3KP44 614 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 CTRB2Q6GPI1 263 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 CLEC19AQ6UXS0 136 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 SLC16A13Q7RTY0 426 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 OR1L8Q8NGR8 309 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 DGCR14Q96DF8 476 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 SPATA25Q9BR10 227 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 HINT2Q9BX68 163 aa12.62□□□□□ -0.39
PDLIM2-217ENST00000491330 MARCH11A6NNE9 402 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 ZNF701M0R085 212 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 B3GALNT1O75752 331 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 ATG12O94817 140 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 AREGP15514 252 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms