RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 FXYD4P59646 89 aa11.83□□□□□ -0.52
SMPD4-220ENST00000491319 HOGA1Q86XE5 327 aa11.83□□□□□ -0.52
SMPD4-220ENST00000491319 SPAG16Q8N0X2 631 aa11.83□□□□□ -0.52
SMPD4-220ENST00000491319 SLC5A7Q9GZV3 580 aa11.83□□□□□ -0.52
SMPD4-220ENST00000491319 Q9H521 79 aa11.83□□□□□ -0.52
SMPD4-220ENST00000491319 SRD5A3Q9H8P0 318 aa11.83□□□□□ -0.52
SMPD4-220ENST00000491319 HRASLSQ9HDD0 168 aa11.83□□□□□ -0.52
SMPD4-220ENST00000491319 BET1LQ9NYM9 111 aa11.83□□□□□ -0.52
SMPD4-220ENST00000491319 IGLV11-55A0A075B6I3 123 aa11.82□□□□□ -0.52
SMPD4-220ENST00000491319 TMEM213A2RRL7 107 aa11.82□□□□□ -0.52
SMPD4-220ENST00000491319 MEIS3P1A6NDR6 274 aa11.82□□□□□ -0.52
SMPD4-220ENST00000491319 MFSD2BA6NFX1 497 aa11.82□□□□□ -0.52
SMPD4-220ENST00000491319 OR11H12B2RN74 326 aa11.82□□□□□ -0.52
SMPD4-220ENST00000491319 DHFRP00374 187 aa11.82□□□□□ -0.52
SMPD4-220ENST00000491319 MSMO1Q15800 293 aa11.82□□□□□ -0.52
SMPD4-220ENST00000491319 GPHB5Q86YW7 130 aa11.82□□□□□ -0.52
SMPD4-220ENST00000491319 EEF1AKMT3Q96AZ1 226 aa11.82□□□□□ -0.52
SMPD4-220ENST00000491319 YTHDF1Q9BYJ9 559 aaKnown RBP11.82□□□□□ -0.52
SMPD4-220ENST00000491319 AUNIPQ9H7T9 357 aa11.82□□□□□ -0.52
SMPD4-220ENST00000491319 TECRQ9NZ01 308 aaKnown RBP11.82□□□□□ -0.52
SMPD4-220ENST00000491319 A0A0A6YYH2 397 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 TRAV3A0A0B4J244 114 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 A6NJ64 397 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 A8MWP6 167 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 RBFOX2O43251 390 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMPD4-220ENST00000491319 DEFA4P12838 97 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 CBLN1P23435 193 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 OR2B8PP59922 312 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 CATR1Q13166 79 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 NEDD8Q15843 81 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 KLK9Q2XQG4 91 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 ZNF818PQ6ZRF7 136 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 TMEM17Q86X19 198 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 TMEM61Q8N0U2 210 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 ZBTB34Q8NCN2 500 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 OR51H1Q8NH63 302 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 OR4A5Q8NH83 315 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 MLXQ9UH92 298 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 KLK9Q9UKQ9 250 aa11.81□□□□□ -0.52
SMPD4-220ENST00000491319 DNAH1Q9P2D7 4330 aa11.8□□□□□ -0.52
SMPD4-220ENST00000491319 IGLC7A0M8Q6 106 aa11.8□□□□□ -0.52
SMPD4-220ENST00000491319 ZNF320A2RRD8 509 aa11.8□□□□□ -0.52
SMPD4-220ENST00000491319 HIST1H1BP16401 226 aaKnown RBP11.8□□□□□ -0.52
SMPD4-220ENST00000491319 TAS2R31P59538 309 aa11.8□□□□□ -0.52
SMPD4-220ENST00000491319 POU2AF1Q16633 256 aa11.8□□□□□ -0.52
SMPD4-220ENST00000491319 DIABLOQ9NR28 239 aa11.8□□□□□ -0.52
SMPD4-220ENST00000491319 UPK2O00526 184 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 S1PR2O95136 353 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 HPRT1P00492 218 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 RPA2P15927 270 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 NQO2P16083 231 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 GPR183P32249 361 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 TGFBR1P36897 503 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 FAM106AQ4KMX7 169 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 AADACL3Q5VUY0 350 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 ZNF57Q68EA5 555 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-220ENST00000491319 BTNL8Q6UX41 500 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 UNQ9165/PRO28630Q6UXU0 137 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 UXS1Q8NBZ7 420 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 OR5AP2Q8NGF4 316 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 AIFM2Q9BRQ8 373 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 TMEM140Q9NV12 185 aa11.79□□□□□ -0.52
SMPD4-220ENST00000491319 TRBV7-1A0A0A6YYK4 115 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 IGHV3-35A0A0C4DH35 117 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 SCAF4O95104 1147 aaKnown RBP11.78□□□□□ -0.52
SMPD4-220ENST00000491319 CLEC3BP05452 202 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 TM4SF20Q53R12 229 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 SLC16A13Q7RTY0 426 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 DMBX1Q8NFW5 382 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 OR10W1Q8NGF6 305 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 ZNF502Q8TBZ5 544 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 GIMAP1Q8WWP7 306 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 CXorf58Q96LI9 332 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 COMMD5Q9GZQ3 224 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 IFT46Q9NQC8 304 aa11.78□□□□□ -0.52
SMPD4-220ENST00000491319 CBX5P45973 191 aa11.77□□□□□ -0.53
SMPD4-220ENST00000491319 HERV-K104P61576 105 aa11.77□□□□□ -0.53
SMPD4-220ENST00000491319 OR52B4Q8NGK2 314 aa11.77□□□□□ -0.53
SMPD4-220ENST00000491319 QTRT1Q9BXR0 403 aaKnown RBP11.77□□□□□ -0.53
SMPD4-220ENST00000491319 PLEKHA2Q9HB19 425 aa11.77□□□□□ -0.53
SMPD4-220ENST00000491319 EHFQ9NZC4 300 aa11.77□□□□□ -0.53
SMPD4-220ENST00000491319 XRCC3O43542 346 aa11.76□□□□□ -0.53
SMPD4-220ENST00000491319 RLN1P04808 185 aa11.76□□□□□ -0.53
SMPD4-220ENST00000491319 GNRHRP30968 328 aa11.76□□□□□ -0.53
SMPD4-220ENST00000491319 SRSF8Q9BRL6 282 aaKnown RBP11.76□□□□□ -0.53
SMPD4-220ENST00000491319 COMMD9Q9P000 198 aa11.76□□□□□ -0.53
SMPD4-220ENST00000491319 MARCH11A6NNE9 402 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 FGF2P09038 288 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 RFX2P48378 723 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 KCTD21Q4G0X4 260 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 ZNF585BQ52M93 769 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 UBE2NLQ5JXB2 153 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 PLET1Q6UQ28 207 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 GDPD1Q8N9F7 314 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 CD300LFQ8TDQ1 290 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 MOB3AQ96BX8 217 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 ZNF2Q9BSG1 426 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-220ENST00000491319 FXYD6Q9H0Q3 95 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 ANAPC10Q9UM13 185 aa11.75□□□□□ -0.53
SMPD4-220ENST00000491319 TGOLN2O43493 480 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms