RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 OR13F1Q8NGS4 319 aa12.41□□□□□ -0.42
SRGAP3-209ENST00000490889 OR5H6Q8NGV6 325 aa12.41□□□□□ -0.42
SRGAP3-209ENST00000490889 SECTM1Q8WVN6 248 aa12.41□□□□□ -0.42
SRGAP3-209ENST00000490889 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
SRGAP3-209ENST00000490889 RHBDL2Q9NX52 303 aa12.41□□□□□ -0.42
SRGAP3-209ENST00000490889 BET1LQ9NYM9 111 aa12.41□□□□□ -0.42
SRGAP3-209ENST00000490889 RRP15Q9Y3B9 282 aaKnown RBP12.41□□□□□ -0.42
SRGAP3-209ENST00000490889 CLEC3BP05452 202 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 HIST1H1BP16401 226 aaKnown RBP12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 PSMB9P28065 219 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 FCGR2CP31995 323 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 HSPA13P48723 471 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 OR2B8PP59922 312 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 GABARAPL2P60520 117 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 SPAG16Q8N0X2 631 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 SPARTQ8N0X7 666 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 BEST4Q8NFU0 473 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 SLC25A38Q96DW6 304 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 GGTLC1Q9BX51 225 aa12.4□□□□□ -0.42
SRGAP3-209ENST00000490889 IGHV3-35A0A0C4DH35 117 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 IGLC7A0M8Q6 106 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 SULT1C2O00338 296 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 SCGNO76038 276 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 DHFRP00374 187 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 FCER2P06734 321 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 CLEC2LP0C7M8 214 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 C8orf88P0DMB2 117 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 DEFA4P12838 97 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 GPR183P32249 361 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 TPRA1Q86W33 373 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 ZNF502Q8TBZ5 544 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 VCX3BQ9H321 246 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 RNF167Q9H6Y7 350 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 HRASLSQ9HDD0 168 aa12.39□□□□□ -0.43
SRGAP3-209ENST00000490889 TRAV18A0A075B6X5 111 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 LOC102724200A0A096LPH7 203 aaPredicted RBP12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 TRBV7-1A0A0A6YYK4 115 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 PPYP01298 95 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 SDC2P34741 201 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 ARPC4P59998 168 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 EWSR1Q01844 656 aaKnown RBP eCLIP12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 MXD1Q05195 221 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 MSMO1Q15800 293 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 ZNF585BQ52M93 769 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 HOGA1Q86XE5 327 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 OR4A5Q8NH83 315 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 CXorf58Q96LI9 332 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 RAB26Q9ULW5 256 aa12.38□□□□□ -0.43
SRGAP3-209ENST00000490889 UPK2O00526 184 aa12.37□□□□□ -0.43
SRGAP3-209ENST00000490889 RBFOX2O43251 390 aaKnown RBP eCLIP12.37□□□□□ -0.43
SRGAP3-209ENST00000490889 MRPS14O60783 128 aaKnown RBP12.37□□□□□ -0.43
SRGAP3-209ENST00000490889 FXYD4P59646 89 aa12.37□□□□□ -0.43
SRGAP3-209ENST00000490889 POU2AF1Q16633 256 aa12.37□□□□□ -0.43
SRGAP3-209ENST00000490889 OR10W1Q8NGF6 305 aa12.37□□□□□ -0.43
SRGAP3-209ENST00000490889 LINC00476Q8WZB0 136 aa12.37□□□□□ -0.43
SRGAP3-209ENST00000490889 SLC5A7Q9GZV3 580 aa12.37□□□□□ -0.43
SRGAP3-209ENST00000490889 FRAS1Q86XX4 4008 aa12.37□□□□□ -0.43
SRGAP3-209ENST00000490889 TRAV25A0A0B4J276 109 aa12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 S1PR2O95136 353 aa12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 RPA2P15927 270 aa12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 TAS2R31P59538 309 aa12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 ZNF818PQ6ZRF7 136 aa12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 ZBTB34Q8NCN2 500 aa12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 OR1L6Q8NGR2 347 aa12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 MARC2Q969Z3 335 aa12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 ZNF436Q9C0F3 470 aaPredicted RBP12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 TMEM140Q9NV12 185 aa12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 MRPL27Q9P0M9 148 aaKnown RBP12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 SSR3Q9UNL2 185 aa12.36□□□□□ -0.43
SRGAP3-209ENST00000490889 TGOLN2O43493 480 aa12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 HPRT1P00492 218 aa12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 NQO2P16083 231 aa12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 PTBP1P26599 531 aaKnown RBP eCLIP12.35□□□□□ -0.435e-7■■■■■ 30
SRGAP3-209ENST00000490889 PMS2P11Q13670 270 aa12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 ANKRD55Q3KP44 614 aa12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 PLET1Q6UQ28 207 aa12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 RBPMS2Q6ZRY4 209 aaKnown RBP12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 OR51H1Q8NH63 302 aa12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 TMEM190Q8WZ59 177 aa12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 AUNIPQ9H7T9 357 aa12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 UBQLN2Q9UHD9 624 aa12.35□□□□□ -0.43
SRGAP3-209ENST00000490889 DNAH10Q8IVF4 4471 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 A0A0J9YWU9 116 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 MEIS3P1A6NDR6 274 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 MFAP2P55001 183 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 ELLP55199 621 aaPredicted RBP12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 WT1-ASQ06250 92 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 CATR1Q13166 79 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 IDNKQ5T6J7 187 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 TMEM17Q86X19 198 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 AIFM2Q9BRQ8 373 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 QTRT1Q9BXR0 403 aaKnown RBP12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 COMMD5Q9GZQ3 224 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 UFC1Q9Y3C8 167 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 ETV7Q9Y603 341 aa12.34□□□□□ -0.43
SRGAP3-209ENST00000490889 OR2T8A6NH00 312 aa12.33□□□□□ -0.44
SRGAP3-209ENST00000490889 GNRHRP30968 328 aa12.33□□□□□ -0.44
SRGAP3-209ENST00000490889 SCAND1P57086 179 aa12.33□□□□□ -0.44
SRGAP3-209ENST00000490889 DEFB135Q30KP9 77 aa12.33□□□□□ -0.44
SRGAP3-209ENST00000490889 ODF3L2Q3SX64 289 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms