RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 TMEM213A2RRL7 107 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 TNFSF12O43508 249 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 SCAF4O95104 1147 aaKnown RBP13.35□□□□□ -0.27
YIPF3-208ENST00000490447 REG1AP05451 166 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 CTRB1P17538 263 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 HLA-GP17693 338 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 CTRB2Q6GPI1 263 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 UXS1Q8NBZ7 420 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 OR4A5Q8NH83 315 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 SECTM1Q8WVN6 248 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 HRASLSQ9HDD0 168 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 TXNL4BQ9NX01 149 aaKnown RBP13.35□□□□□ -0.27
YIPF3-208ENST00000490447 MLXQ9UH92 298 aa13.35□□□□□ -0.27
YIPF3-208ENST00000490447 LOC102724200A0A096LPH7 203 aaPredicted RBP13.34□□□□□ -0.27
YIPF3-208ENST00000490447 EIF4EBP1Q13541 118 aaPredicted RBP13.34□□□□□ -0.27
YIPF3-208ENST00000490447 BTNL8Q6UX41 500 aa13.34□□□□□ -0.27
YIPF3-208ENST00000490447 RBPMS2Q6ZRY4 209 aaKnown RBP13.34□□□□□ -0.27
YIPF3-208ENST00000490447 GPR141Q7Z602 305 aa13.34□□□□□ -0.27
YIPF3-208ENST00000490447 TPRA1Q86W33 373 aa13.34□□□□□ -0.27
YIPF3-208ENST00000490447 LGALS14Q8TCE9 139 aa13.34□□□□□ -0.27
YIPF3-208ENST00000490447 BET1LQ9NYM9 111 aa13.34□□□□□ -0.27
YIPF3-208ENST00000490447 A0A1B0GW64 132 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 SSX5O60225 188 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 CLEC3BP05452 202 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 FGF9P31371 208 aaPredicted RBP13.33□□□□□ -0.28
YIPF3-208ENST00000490447 BRWD1-AS2P59051 145 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 TIMM50Q3ZCQ8 353 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 SFXN4Q6P4A7 337 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 SPAG16Q8N0X2 631 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 BEST4Q8NFU0 473 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 OR13F1Q8NGS4 319 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 MARC2Q969Z3 335 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 GPHA2Q96T91 129 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 BATF3Q9NR55 127 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 THYN1Q9P016 225 aa13.33□□□□□ -0.28
YIPF3-208ENST00000490447 IGLV11-55A0A075B6I3 123 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 MFSD2BA6NFX1 497 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 FCGR2CP31995 323 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 GPR183P32249 361 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 CATR1Q13166 79 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 MSMO1Q15800 293 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 ZBTB34Q8NCN2 500 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 OR1L6Q8NGR2 347 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 COMMD5Q9GZQ3 224 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 CCL28Q9NRJ3 127 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 RHBDL2Q9NX52 303 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 SSR3Q9UNL2 185 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 UFC1Q9Y3C8 167 aa13.32□□□□□ -0.28
YIPF3-208ENST00000490447 TRAV25A0A0B4J276 109 aa13.31□□□□□ -0.28
YIPF3-208ENST00000490447 CYB5BO43169 146 aa13.31□□□□□ -0.28
YIPF3-208ENST00000490447 MYOD1P15172 320 aa13.31□□□□□ -0.28
YIPF3-208ENST00000490447 TAS2R31P59538 309 aa13.31□□□□□ -0.28
YIPF3-208ENST00000490447 KLK9Q2XQG4 91 aa13.31□□□□□ -0.28
YIPF3-208ENST00000490447 ZNF585BQ52M93 769 aa13.31□□□□□ -0.28
YIPF3-208ENST00000490447 TM4SF20Q53R12 229 aa13.31□□□□□ -0.28
YIPF3-208ENST00000490447 PLET1Q6UQ28 207 aa13.31□□□□□ -0.28
YIPF3-208ENST00000490447 NDUFA13Q9P0J0 144 aa13.31□□□□□ -0.28
YIPF3-208ENST00000490447 KLK9Q9UKQ9 250 aa13.31□□□□□ -0.28
YIPF3-208ENST00000490447 SULT1C2O00338 296 aa13.3□□□□□ -0.28
YIPF3-208ENST00000490447 RBFOX2O43251 390 aaKnown RBP eCLIP13.3□□□□□ -0.28
YIPF3-208ENST00000490447 HPRT1P00492 218 aa13.3□□□□□ -0.28
YIPF3-208ENST00000490447 PPYP01298 95 aa13.3□□□□□ -0.28
YIPF3-208ENST00000490447 NQO2P16083 231 aa13.3□□□□□ -0.28
YIPF3-208ENST00000490447 UNQ9165/PRO28630Q6UXU0 137 aa13.3□□□□□ -0.28
YIPF3-208ENST00000490447 SLC38A6Q8IZM9 456 aa13.3□□□□□ -0.28
YIPF3-208ENST00000490447 DMBX1Q8NFW5 382 aa13.3□□□□□ -0.28
YIPF3-208ENST00000490447 OVOL2Q9BRP0 275 aa13.3□□□□□ -0.28
YIPF3-208ENST00000490447 SLC5A7Q9GZV3 580 aa13.3□□□□□ -0.28
YIPF3-208ENST00000490447 MRPL27Q9P0M9 148 aaKnown RBP13.3□□□□□ -0.28
YIPF3-208ENST00000490447 TRAV18A0A075B6X5 111 aa13.29□□□□□ -0.28
YIPF3-208ENST00000490447 CXorf65A6NEN9 183 aa13.29□□□□□ -0.28
YIPF3-208ENST00000490447 CGB1A6NKQ9 187 aa13.29□□□□□ -0.28
YIPF3-208ENST00000490447 ELLP55199 621 aaPredicted RBP13.29□□□□□ -0.28
YIPF3-208ENST00000490447 FXYD4P59646 89 aa13.29□□□□□ -0.28
YIPF3-208ENST00000490447 OR2B8PP59922 312 aa13.29□□□□□ -0.28
YIPF3-208ENST00000490447 GVQW1Q8N7I0 195 aa13.29□□□□□ -0.28
YIPF3-208ENST00000490447 YIPF6Q96EC8 236 aa13.29□□□□□ -0.28
YIPF3-208ENST00000490447 SRSF8Q9BRL6 282 aaKnown RBP13.29□□□□□ -0.28
YIPF3-208ENST00000490447 IGHV3-35A0A0C4DH35 117 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 SMIM31A0A1B0GVY4 71 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 PTHLHP12272 177 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 PTBP1P26599 531 aaKnown RBP eCLIP13.28□□□□□ -0.28
YIPF3-208ENST00000490447 APOC4P55056 127 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 SCAND1P57086 179 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 MXD1Q05195 221 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 PMS2P11Q13670 270 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 HOGA1Q86XE5 327 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 OR2C3Q8N628 320 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 ZNF502Q8TBZ5 544 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 CD300LFQ8TDQ1 290 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 QTRT1Q9BXR0 403 aaKnown RBP13.28□□□□□ -0.28
YIPF3-208ENST00000490447 TMEM140Q9NV12 185 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 ETV7Q9Y603 341 aa13.28□□□□□ -0.28
YIPF3-208ENST00000490447 IGLC7A0M8Q6 106 aa13.27□□□□□ -0.29
YIPF3-208ENST00000490447 UPK2O00526 184 aa13.27□□□□□ -0.29
YIPF3-208ENST00000490447 TGOLN2O43493 480 aa13.27□□□□□ -0.29
YIPF3-208ENST00000490447 C8orf88P0DMB2 117 aa13.27□□□□□ -0.29
YIPF3-208ENST00000490447 SDC2P34741 201 aa13.27□□□□□ -0.29
YIPF3-208ENST00000490447 AADACL3Q5VUY0 350 aa13.27□□□□□ -0.29
YIPF3-208ENST00000490447 THOC7Q6I9Y2 204 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms