RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 GNB1LQ9BYB4 327 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 PARP12Q9H0J9 701 aaKnown RBP2.16□□□□□ -2.06
UBXN4-208ENST00000490163 NXF5Q9H1B4 397 aaKnown RBP2.16□□□□□ -2.06
UBXN4-208ENST00000490163 MTFP1Q9UDX5 166 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 PSG11Q9UQ72 335 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 SLC22A13Q9Y226 551 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 TBL2Q9Y4P3 447 aaKnown RBP2.16□□□□□ -2.06
UBXN4-208ENST00000490163 HEATR5AQ86XA9 2040 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 A0A1W2PRS3 328 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 PMS2P5A8MQ11 134 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 FAM166BA8MTA8 275 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 C12orf77C9JDV5 145 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 CORTO00230 105 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 TRAF3IP2O43734 574 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-208ENST00000490163 MMP23AO75900 390 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 WISP3O95389 354 aaPredicted RBP2.16□□□□□ -2.06
UBXN4-208ENST00000490163 HLA-DQB2P05538 268 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 KCNE1P15382 129 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 CDK2P24941 298 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 HTR1FP30939 366 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 PYCR1P32322 319 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 PRSS3P35030 304 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 TAS2R41P59536 307 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 CKS1BP61024 79 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 RPL31P62899 125 aaKnown RBP2.16□□□□□ -2.06
UBXN4-208ENST00000490163 SLC35A1P78382 337 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 TMEM42Q69YG0 159 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 GTF2H5Q6ZYL4 71 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF429Q86V71 674 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF101Q8IZC7 436 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 GATD1Q8NB37 220 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 TSTD1Q8NFU3 115 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 OR10G9Q8NGN4 311 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 OR6K6Q8NGW6 343 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 FAM222BQ8WU58 562 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 C11orf40Q8WZ69 217 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 NDRG1Q92597 394 aaKnown RBP2.16□□□□□ -2.06
UBXN4-208ENST00000490163 DERL3Q96Q80 235 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 OR7D2Q96RA2 312 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 TIMM29Q9BSF4 260 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 CHST6Q9GZX3 395 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 PRSS21Q9Y6M0 314 aa2.16□□□□□ -2.06
UBXN4-208ENST00000490163 LYRM9A8MSI8 78 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 K7EN84 100 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 RBFOX2O43251 390 aaKnown RBP eCLIP2.15□□□□□ -2.06
UBXN4-208ENST00000490163 HCRTO43612 131 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 FGF17O60258 216 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 CYB5AP00167 134 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 SERPINA7P05543 415 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 OR9G9P0C7N8 305 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 PTHLHP12272 177 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 CCL5P13501 91 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 MDKP21741 143 aaPredicted RBP2.15□□□□□ -2.06
UBXN4-208ENST00000490163 OMGP23515 440 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 ADORA2BP29275 332 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 HINT1P49773 126 aaPredicted RBP2.15□□□□□ -2.06
UBXN4-208ENST00000490163 TPPP2P59282 170 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 HLA-DRB3P79483 266 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 FAM3AP98173 230 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 PRSS54Q6PEW0 395 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 DNM1P46Q6ZS02 220 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 TMEM150AQ86TG1 271 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 COX18Q8N8Q8 333 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 OR6T1Q8NGN1 323 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 OR4S2Q8NH73 311 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 FAM213BQ8TBF2 198 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 CXorf40AQ8TE69 158 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 MS4A6EQ96DS6 147 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 AP1S3Q96PC3 154 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 KIR2DL4Q99706 377 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 TMEM204Q9BSN7 226 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 EBPLQ9BY08 206 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 ELL3Q9HB65 397 aaPredicted RBP2.15□□□□□ -2.06
UBXN4-208ENST00000490163 CYTL1Q9NRR1 136 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 VPS29Q9UBQ0 182 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 KLK13Q9UKR3 277 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 V9GY05 133 aa2.15□□□□□ -2.06
UBXN4-208ENST00000490163 TRBV24-1A0A075B6N3 115 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 MEIS3P1A6NDR6 274 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 IFITM5A6NNB3 132 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 F5H5T6 163 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 H7BYZ3 331 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 DUSP14O95147 198 aaKnown RBP2.15□□□□□ -2.07
UBXN4-208ENST00000490163 DUS4LO95620 317 aaKnown RBP2.15□□□□□ -2.07
UBXN4-208ENST00000490163 LY6G6DO95868 133 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 CD3DP04234 171 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 CEACAM3P40198 252 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 PPICP45877 212 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 RAB38P57729 211 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 TAS2R31P59538 309 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 SSBP1Q04837 148 aaKnown RBP2.15□□□□□ -2.07
UBXN4-208ENST00000490163 SMAGPQ0VAQ4 97 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 NOXRED1Q6NXP6 359 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF440Q8IYI8 595 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 TCTEX1D1Q8N7M0 179 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF485Q8NCK3 441 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 SLC16A11Q8NCK7 471 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 OR52R1Q8NGF1 315 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 OR5AK2Q8NH90 309 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 SRSF12Q8WXF0 261 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms