RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 ADAT3Q96EY9 351 aaPredicted RBP8.21□□□□□ -1.1
NOD1-208ENST00000489614 PLEKHF2Q9H8W4 249 aa8.21□□□□□ -1.1
NOD1-208ENST00000489614 FBLN5Q9UBX5 448 aa8.21□□□□□ -1.1
NOD1-208ENST00000489614 PTPRQQ9UMZ3 2332 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 hCG_38984A0A1B0GV85 526 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 M0R1X1 148 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 SPINK4O60575 86 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 IGKV3-15P01624 115 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 WNT2P09544 360 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 IGLC1P0CG04 106 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 IGLL1P15814 213 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 PLP1P60201 277 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 MEF2BQ02080 365 aaPredicted RBP8.2□□□□□ -1.1
NOD1-208ENST00000489614 TGFBR3Q03167 851 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 STPG3Q8N7X2 389 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 KCNG3Q8TAE7 436 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 MRPL30Q8TCC3 161 aaKnown RBP8.2□□□□□ -1.1
NOD1-208ENST00000489614 ANAPC16Q96DE5 110 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 C1orf147Q96MC9 270 aaPredicted RBP8.2□□□□□ -1.1
NOD1-208ENST00000489614 MRPL18Q9H0U6 180 aaKnown RBP8.2□□□□□ -1.1
NOD1-208ENST00000489614 ZNF391Q9UJN7 358 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 PSG11Q9UQ72 335 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 POLR1DQ9Y2S0 133 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 INTS1Q8N201 2190 aaKnown RBP8.2□□□□□ -1.1
NOD1-208ENST00000489614 NKX2-6A6NCS4 301 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 CRYM-AS1A6NIL9 109 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 ZNF732B4DXR9 585 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 K7EQM0 130 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 M0R135 149 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 PHF1O43189 567 aaPredicted RBP8.2□□□□□ -1.1
NOD1-208ENST00000489614 RAMP3O60896 148 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 PITX3O75364 302 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 HERV-K104P63124 156 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 RAB31Q13636 194 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 STUMQ69YW2 141 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 DOK3Q7L591 496 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 OR4A5Q8NH83 315 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 LHX4Q969G2 390 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 ZNF799Q96GE5 643 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 SFXN3Q9BWM7 321 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 ZNF286AQ9HBT8 521 aa8.2□□□□□ -1.1
NOD1-208ENST00000489614 SMG1Q96Q15 3661 aaKnown RBP8.2□□□□□ -1.1
NOD1-208ENST00000489614 TANC2Q9HCD6 1990 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 IGKV1-9A0A0C4DH69 117 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 FBLL1A6NHQ2 334 aaKnown RBP8.19□□□□□ -1.1
NOD1-208ENST00000489614 FCN1O00602 326 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 IGHV3-9P01782 118 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 PATE4P0C8F1 98 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 LCN2P80188 198 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 OR4P4Q8NGL7 312 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 NPVFQ9HCQ7 196 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 PPP1R3CQ9UQK1 317 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.19□□□□□ -1.1
NOD1-208ENST00000489614 GPR6P46095 362 aaPredicted RBP8.19□□□□□ -1.1
NOD1-208ENST00000489614 ZNF474Q6S9Z5 364 aaPredicted RBP8.19□□□□□ -1.1
NOD1-208ENST00000489614 PNKDQ8N490 385 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 OR51E1Q8TCB6 317 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 P2RX4Q99571 388 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 HDHD3Q9BSH5 251 aaPredicted RBP8.19□□□□□ -1.1
NOD1-208ENST00000489614 HINT2Q9BX68 163 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 CENPMQ9NSP4 180 aa8.19□□□□□ -1.1
NOD1-208ENST00000489614 DHRS3O75911 302 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 THBS3P49746 956 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 KLRB1Q12918 225 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 TMEM187Q14656 261 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 CENPVQ7Z7K6 275 aaPredicted RBP8.18□□□□□ -1.1
NOD1-208ENST00000489614 SPTSSAQ969W0 71 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 RCHY1Q96PM5 261 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 GPHA2Q96T91 129 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 C12orf49Q9H741 205 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 GNB4Q9HAV0 340 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 TMEM50AO95807 157 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 IER3P46695 156 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 TAS2R46P59540 309 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 BVES-AS1Q5T3Y7 98 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 PLCXD3Q63HM9 321 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 GTF2H5Q6ZYL4 71 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 CACNG8Q8WXS5 425 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 BORCS7Q96B45 105 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 GPER1Q99527 375 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 TMEM59Q9BXS4 323 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 GEMIN7Q9H840 131 aaKnown RBP8.18□□□□□ -1.1
NOD1-208ENST00000489614 OBP2BQ9NPH6 170 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 OR51B2Q9Y5P1 312 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 A0A0G2JNJ9 132 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 FAM231BA6NCW3 169 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 CNIH1O95406 144 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 IFNA1P01562 189 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 IFNA5P01569 189 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 KITLGP21583 273 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 GATA3P23771 443 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 OR3A4PP47883 348 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 ASCL4Q6XD76 172 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 MRPL21Q7Z2W9 205 aaKnown RBP8.18□□□□□ -1.1
NOD1-208ENST00000489614 OR10V1Q8NGI7 309 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 OR51T1Q8NGJ9 327 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 OR5B3Q8NH48 314 aa8.18□□□□□ -1.1
NOD1-208ENST00000489614 REPIN1Q9BWE0 567 aaKnown RBP8.18□□□□□ -1.1
NOD1-208ENST00000489614 TM2D1Q9BX74 207 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms