RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 Q8N2B8 174 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 OR5M8Q8NGP6 311 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 OR1L8Q8NGR8 309 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 OR52E5Q8NH55 327 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 OR1S1Q8NH92 325 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 ARPC1AQ92747 370 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 ZNF580Q9UK33 172 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 OR51B2Q9Y5P1 312 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 C5orf51A6NDU8 294 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 FAM90A26D6RGX4 464 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 FCN1O00602 326 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 GOSR2O14653 212 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 PITX3O75364 302 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 TSPAN9O75954 239 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 RPL27AP46776 148 aaKnown RBP10.99□□□□□ -0.65
C9orf3-221ENST00000489562 OR2B8PP59922 312 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 HSPE1P61604 102 aaKnown RBP10.99□□□□□ -0.65
C9orf3-221ENST00000489562 GNB1P62873 340 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 BLCAPP62952 87 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 IZUMO4Q1ZYL8 232 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 IAH1Q2TAA2 248 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-221ENST00000489562 ARSJQ5FYB0 599 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-221ENST00000489562 C9orf152Q5JTZ5 239 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 Q6ZRM9 215 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 SLC35E3Q7Z769 313 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 MRPL41Q8IXM3 137 aaKnown RBP10.99□□□□□ -0.65
C9orf3-221ENST00000489562 SRSF12Q8WXF0 261 aaKnown RBP10.99□□□□□ -0.65
C9orf3-221ENST00000489562 C2orf50Q96LR7 162 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 SRSF8Q9BRL6 282 aaKnown RBP10.99□□□□□ -0.65
C9orf3-221ENST00000489562 MGAT4CQ9UBM8 478 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 NSG2Q9Y328 171 aa10.99□□□□□ -0.65
C9orf3-221ENST00000489562 C13orf42A0A1B0GVH6 325 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 FAM25EA8MYX2 175 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 AP4M1O00189 453 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 CCSO14618 274 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 ST8SIA3O43173 380 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 NDUFA7O95182 113 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 CRIP2P52943 208 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-221ENST00000489562 SPCS3P61009 180 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 SSBP2P81877 361 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-221ENST00000489562 CYCSP99999 105 aaKnown RBP10.98□□□□□ -0.65
C9orf3-221ENST00000489562 PDLIM3Q53GG5 364 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-221ENST00000489562 HSD17B13Q7Z5P4 300 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-221ENST00000489562 ZBTB8BQ8NAP8 495 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-221ENST00000489562 OR2T6Q8NHC8 308 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 ASB13Q8WXK3 278 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 OR10C1Q96KK4 312 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 TMEM68Q96MH6 324 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 HSPB9Q9BQS6 159 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 QTRT1Q9BXR0 403 aaKnown RBP10.98□□□□□ -0.65
C9orf3-221ENST00000489562 ZNF702PQ9H963 129 aa10.98□□□□□ -0.65
C9orf3-221ENST00000489562 NIPBLQ6KC79 2804 aaeCLIP10.98□□□□□ -0.65
C9orf3-221ENST00000489562 JMJD1CQ15652 2540 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 TEX50A0A1B0GTY4 177 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 A0A1W2PN81 502 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 SH2D7A6NKC9 451 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-221ENST00000489562 MPTX1A8MV57 137 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 MED6O75586 246 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 IFNA17P01571 189 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 IGF1P05019 195 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 TRAPPC2P0DI81 140 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 TRAPPC2BP0DI82 140 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 CHRNA7P36544 502 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 PRCDQ00LT1 54 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 TMEM267Q0VDI3 215 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-221ENST00000489562 C2orf68Q2NKX9 166 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 Q6ZSV7 163 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 OR4D5Q8NGN0 318 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 SGMS2Q8NHU3 365 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 GRPEL2Q8TAA5 225 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 ABHD5Q8WTS1 349 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 GON7Q9BXV9 100 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 C16orf95Q9H693 158 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 PARP11Q9NR21 331 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 ZFP57Q9NU63 452 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 HSPB7Q9UBY9 170 aa10.97□□□□□ -0.65
C9orf3-221ENST00000489562 ATP6V0E1O15342 81 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 LY86O95711 162 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 NKX2-1P43699 371 aaPredicted RBP10.96□□□□□ -0.65
C9orf3-221ENST00000489562 VDAC2P45880 294 aaPredicted RBP10.96□□□□□ -0.65
C9orf3-221ENST00000489562 NDPQ00604 133 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 TNFRSF9Q07011 255 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 FCN2Q15485 313 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 C10orf55Q5SWW7 151 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 OR4F5Q8NH21 305 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 FYTTD1Q96QD9 318 aaKnown RBP10.96□□□□□ -0.65
C9orf3-221ENST00000489562 NMES1Q9C002 83 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 PLEKHA3Q9HB20 300 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 ENY2Q9NPA8 101 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 NDUFA4L2Q9NRX3 87 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 GSKIPQ9P0R6 139 aa10.96□□□□□ -0.65
C9orf3-221ENST00000489562 HMX3A6NHT5 357 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 MSGN1A6NI15 193 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 INS-IGF2F8WCM5 200 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 OPN1MWP04001 364 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 OPN1MW2P0DN77 364 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 OPN1MW3P0DN78 364 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 H2BFSP57053 126 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 ID3Q02535 119 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 SRSF4Q08170 494 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms