RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 HSD17B10Q99714 261 aaKnown RBP8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 SPIN2AQ99865 258 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 CITED2Q99967 270 aaPredicted RBP8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 SPIN2BQ9BPZ2 258 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 PLSCR3Q9NRY6 295 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 BOLA1Q9Y3E2 137 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 TMED3Q9Y3Q3 217 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 C3orf85A0A1B0GTC6 90 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 ARPC5O15511 151 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 IGKV1-16P04430 117 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 AMY1AP04745 511 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 TMEM11P17152 192 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 PDLIM3Q53GG5 364 aaPredicted RBP8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 HIST2H2BDQ6DRA6 164 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 TMUB2Q71RG4 321 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 CENPVQ7Z7K6 275 aaPredicted RBP8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 TCTEX1D2Q8WW35 142 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 IL22RA2Q969J5 263 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 RITA1Q96K30 269 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 ARL6Q9H0F7 186 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 TMEM222Q9H0R3 208 aa8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 FAM212BQ9NTI7 297 aaPredicted RBP8.36□□□□□ -1.07
SCAMP4-208ENST00000489554 IGHV3-72A0A0B4J1Y9 119 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 ADARB2-AS1A8MUL3 147 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 G3V3Q6 166 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 RBFOX2O43251 390 aaKnown RBP eCLIP8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 FGF16O43320 207 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 TXNL1O43396 289 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 ATG12O94817 140 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 MPC2O95563 127 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 IGKV1D-33P01593 117 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 IGKV1-33P01594 117 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 EBI3Q14213 229 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 OR2B11Q5JQS5 317 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 C9orf152Q5JTZ5 239 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 MOB3BQ86TA1 216 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 SPAG16Q8N0X2 631 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 KCNRGQ8N5I3 272 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 Q8N6K4 173 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 C5orf56Q8N8D9 126 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 ZNF680Q8NEM1 530 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 OR4X2Q8NGF9 303 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 R3HDM4Q96D70 268 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 WDR89Q96FK6 387 aaPredicted RBP8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 SEC22AQ96IW7 307 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 ADTRPQ96IZ2 230 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 TMEM56Q96MV1 263 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 LIN7CQ9NUP9 197 aaKnown RBP8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 TNFSF18Q9UNG2 199 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 TMEM56-RWDD3S4R434 201 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 VWFP04275 2813 aa8.35□□□□□ -1.07
SCAMP4-208ENST00000489554 A0A0G2JRQ6 117 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 SRRM4A7MD48 611 aaKnown RBP8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 TAAR5O14804 337 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 FCGR3BO75015 233 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 S1PR2O95136 353 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 CDS2O95674 445 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 IGLV2-23P01705 113 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 P0C879 139 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 LYL1P12980 280 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 CD1BP29016 333 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 LPAR6P43657 344 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 CATR1Q13166 79 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 TMEM177Q53S58 311 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 Q5BKY6 102 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 EIF5AL1Q6IS14 154 aaKnown RBP8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 PRSS54Q6PEW0 395 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 ZNF695Q8IW36 515 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 SELENOHQ8IZQ5 122 aaKnown RBP8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 TCTEX1D1Q8N7M0 179 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 OR2T10Q8NGZ9 312 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 LRRC20Q8TCA0 184 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 PHYHIPLQ96FC7 376 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 SLC35D1Q9NTN3 355 aa8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 TSSC4Q9Y5U2 329 aaPredicted RBP8.34□□□□□ -1.07
SCAMP4-208ENST00000489554 NOTCH1P46531 2555 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 TCRBV4S1A1TA0A5B7 111 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 SH2D7A6NKC9 451 aaPredicted RBP8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 IGKV1-5P01602 117 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 IL6RP08887 468 aaPredicted RBP8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 HOXB5P09067 269 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 CXCL2P19875 107 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 PVALBP20472 110 aaPredicted RBP8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 CNTFRP26992 372 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 HTR2BP41595 481 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 KIR2DS2P43631 304 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 HNF4GQ14541 408 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 POU2AF1Q16633 256 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 MRGPRG-AS1Q2M3A8 158 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 IAH1Q2TAA2 248 aaPredicted RBP8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 CLLU1Q5K131 121 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 THOC7Q6I9Y2 204 aaKnown RBP8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 PDPNQ86YL7 162 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 C1QL4Q86Z23 238 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 SCARB1Q8WTV0 552 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 EAF1Q96JC9 268 aaPredicted RBP8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 ARPC5LQ9BPX5 153 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 PLEKHA2Q9HB19 425 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 PRELID3BQ9Y3B1 194 aa8.33□□□□□ -1.08
SCAMP4-208ENST00000489554 WASHC3Q9Y3C0 194 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms