RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 KRTAP9-6A0A140TA67 174 aa10.48□□□□□ -0.73
UFD1-209ENST00000489406 TEX48A0A1B0GUV7 120 aa10.48□□□□□ -0.73
UFD1-209ENST00000489406 YIF1AO95070 293 aa10.48□□□□□ -0.73
UFD1-209ENST00000489406 CD3GP09693 182 aa10.48□□□□□ -0.73
UFD1-209ENST00000489406 GBX2P52951 348 aaPredicted RBP10.48□□□□□ -0.73
UFD1-209ENST00000489406 OXA1LQ15070 435 aa10.48□□□□□ -0.73
UFD1-209ENST00000489406 GSG1LQ6UXU4 331 aa10.48□□□□□ -0.73
UFD1-209ENST00000489406 UBAC2Q8NBM4 344 aa10.48□□□□□ -0.73
UFD1-209ENST00000489406 ADTRPQ96IZ2 230 aa10.48□□□□□ -0.73
UFD1-209ENST00000489406 TRAV14DV4A0A0A6YYC5 116 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 TRBV6-6A0A0A6YYG2 114 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 CGB1A6NKQ9 187 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 ST8SIA3O43173 380 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 FCGR3BO75015 233 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 KBTBD11O94819 623 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 CRHBPP24387 322 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 POLR2IP36954 125 aaKnown RBP10.47□□□□□ -0.73
UFD1-209ENST00000489406 OR2B8PP59922 312 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 MRPL28Q13084 256 aaKnown RBP10.47□□□□□ -0.73
UFD1-209ENST00000489406 ARFRP1Q13795 201 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 SSX7Q7RTT5 188 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 LILRB2Q8N423 598 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 TMEM167AQ8TBQ9 72 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 NRBF2Q96F24 287 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 Q9H3A6 140 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 Q9N2K0 584 aa10.47□□□□□ -0.73
UFD1-209ENST00000489406 PLA2G1BP04054 148 aaKnown RBP10.46□□□□□ -0.73
UFD1-209ENST00000489406 GNB3P16520 340 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 HTR2CP28335 458 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 USF2Q15853 346 aaPredicted RBP10.46□□□□□ -0.73
UFD1-209ENST00000489406 OR2B11Q5JQS5 317 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 OR10K2Q6IF99 312 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 DUSP18Q8NEJ0 188 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 ST8SIA2Q92186 375 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 DGCR14Q96DF8 476 aaKnown RBP10.46□□□□□ -0.73
UFD1-209ENST00000489406 NEU1Q99519 415 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 C1QTNF4Q9BXJ3 329 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 RIMS4Q9H426 269 aaPredicted RBP10.46□□□□□ -0.73
UFD1-209ENST00000489406 CKLFQ9UBR5 152 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 AK3Q9UIJ7 227 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 MGAT4AQ9UM21 535 aa10.46□□□□□ -0.73
UFD1-209ENST00000489406 IGHV3OR16-12A0A075B7B8 117 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 TRAV2A0A0B4J234 112 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 IGHV3-66A0A0C4DH42 116 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 CD5P06127 495 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 ZNF688P0C7X2 276 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 DAD1P61803 113 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 ZNF705AQ6ZN79 300 aaPredicted RBP10.45□□□□□ -0.74
UFD1-209ENST00000489406 OR10C1Q96KK4 312 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 PLEKHJ1Q9NW61 149 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 ZNF586Q9NXT0 402 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 C21orf62Q9NYP8 219 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 EXOGQ9Y2C4 368 aaKnown RBP10.45□□□□□ -0.74
UFD1-209ENST00000489406 RBM7Q9Y580 266 aaKnown RBP10.45□□□□□ -0.74
UFD1-209ENST00000489406 RFNGQ9Y644 331 aa10.45□□□□□ -0.74
UFD1-209ENST00000489406 A0A1W2PPQ1 181 aa10.44□□□□□ -0.74
UFD1-209ENST00000489406 BET1O15155 118 aa10.44□□□□□ -0.74
UFD1-209ENST00000489406 OXTP01178 125 aa10.44□□□□□ -0.74
UFD1-209ENST00000489406 APOHP02749 345 aaPredicted RBP10.44□□□□□ -0.74
UFD1-209ENST00000489406 EIF4EP06730 217 aaKnown RBP10.44□□□□□ -0.74
UFD1-209ENST00000489406 GCSHP23434 173 aa10.44□□□□□ -0.74
UFD1-209ENST00000489406 ERVFC1-1P60608 527 aa10.44□□□□□ -0.74
UFD1-209ENST00000489406 Q56UQ5 140 aa10.44□□□□□ -0.74
UFD1-209ENST00000489406 XAF1Q6GPH4 301 aa10.44□□□□□ -0.74
UFD1-209ENST00000489406 Q6ZRN7 208 aaPredicted RBP10.44□□□□□ -0.74
UFD1-209ENST00000489406 PUSL1Q8N0Z8 303 aaKnown RBP10.44□□□□□ -0.74
UFD1-209ENST00000489406 VSTM2AQ8TAG5 236 aa10.44□□□□□ -0.74
UFD1-209ENST00000489406 LGALS12Q96DT0 336 aa10.44□□□□□ -0.74
UFD1-209ENST00000489406 MYCBPQ99417 103 aaPredicted RBP10.44□□□□□ -0.74
UFD1-209ENST00000489406 TAGLN3Q9UI15 199 aa10.44□□□□□ -0.74
UFD1-209ENST00000489406 PUS1Q9Y606 427 aaKnown RBP eCLIP10.44□□□□□ -0.74
UFD1-209ENST00000489406 A0A1W2PPK0 400 aa10.43□□□□□ -0.74
UFD1-209ENST00000489406 IGLC7A0M8Q6 106 aa10.43□□□□□ -0.74
UFD1-209ENST00000489406 SMIM9A6NGZ8 99 aa10.43□□□□□ -0.74
UFD1-209ENST00000489406 ZNF705FA8MVS1 300 aaPredicted RBP10.43□□□□□ -0.74
UFD1-209ENST00000489406 CTSGP08311 255 aa10.43□□□□□ -0.74
UFD1-209ENST00000489406 ZNF705DP0CH99 300 aaPredicted RBP10.43□□□□□ -0.74
UFD1-209ENST00000489406 ZNF705BP0CI00 300 aaPredicted RBP10.43□□□□□ -0.74
UFD1-209ENST00000489406 SERPINB10P48595 397 aa10.43□□□□□ -0.74
UFD1-209ENST00000489406 LINC00315P59091 139 aa10.43□□□□□ -0.74
UFD1-209ENST00000489406 RPL8P62917 257 aaKnown RBP10.43□□□□□ -0.74
UFD1-209ENST00000489406 CLINT1Q14677 625 aa10.43□□□□□ -0.74
UFD1-209ENST00000489406 SLC25A24Q6NUK1 477 aa10.43□□□□□ -0.74
UFD1-209ENST00000489406 LRRTM1Q86UE6 522 aa10.43□□□□□ -0.74
UFD1-209ENST00000489406 SCARB1Q8WTV0 552 aa10.43□□□□□ -0.74
UFD1-209ENST00000489406 TRDCB7Z8K6 153 aa10.42□□□□□ -0.74
UFD1-209ENST00000489406 K7EQG2 157 aa10.42□□□□□ -0.74
UFD1-209ENST00000489406 PRB4P10163 310 aaPredicted RBP10.42□□□□□ -0.74
UFD1-209ENST00000489406 HLA-GP17693 338 aa10.42□□□□□ -0.74
UFD1-209ENST00000489406 SRMP19623 302 aa10.42□□□□□ -0.74
UFD1-209ENST00000489406 NUTF2P61970 127 aaKnown RBP10.42□□□□□ -0.74
UFD1-209ENST00000489406 RELQ04864 619 aaPredicted RBP10.42□□□□□ -0.74
UFD1-209ENST00000489406 IGSF11Q5DX21 431 aa10.42□□□□□ -0.74
UFD1-209ENST00000489406 KDM4DQ6B0I6 523 aa10.42□□□□□ -0.74
UFD1-209ENST00000489406 CDH26Q8IXH8 852 aa10.42□□□□□ -0.74
UFD1-209ENST00000489406 STXBP6Q8NFX7 210 aa10.42□□□□□ -0.74
UFD1-209ENST00000489406 GGHQ92820 318 aa10.42□□□□□ -0.74
UFD1-209ENST00000489406 CCDC124Q96CT7 223 aaKnown RBP10.42□□□□□ -0.74
UFD1-209ENST00000489406 VSIRQ9H7M9 311 aa10.42□□□□□ -0.74
UFD1-209ENST00000489406 ERVK13-1Q9NX77 482 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms