RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, human

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG9A-222	ENST00000488833	CRYGC	P07315	174 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	DEFA4	P12838	97 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	HIST1H1B	P16401	226 aa	Known RBP	13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	CTRB1	P17538	263 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	CATR1	Q13166	79 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	CTRB2	Q6GPI1	263 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	TMEM17	Q86X19	198 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	DEFB125	Q8N687	156 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	OR4A5	Q8NH83	315 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	CACNG8	Q8WXS5	425 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	WDR89	Q96FK6	387 aa	Predicted RBP	13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	AIFM2	Q9BRQ8	373 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	WFDC10A	Q9H1F0	79 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	DIABLO	Q9NR28	239 aa		13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	TECR	Q9NZ01	308 aa	Known RBP	13.81	□□□□□ -0.2
ATG9A-222	ENST00000488833	MEIS3P1	A6NDR6	274 aa		13.8	□□□□□ -0.2
ATG9A-222	ENST00000488833	SULT1C2	O00338	296 aa		13.8	□□□□□ -0.2
ATG9A-222	ENST00000488833	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
ATG9A-222	ENST00000488833	CBX5	P45973	191 aa		13.8	□□□□□ -0.2
ATG9A-222	ENST00000488833	GPHB5	Q86YW7	130 aa		13.8	□□□□□ -0.2
ATG9A-222	ENST00000488833	FAM110A	Q9BQ89	295 aa		13.8	□□□□□ -0.2
ATG9A-222	ENST00000488833	SRD5A3	Q9H8P0	318 aa		13.8	□□□□□ -0.2
ATG9A-222	ENST00000488833	ZC4H2	Q9NQZ6	224 aa		13.8	□□□□□ -0.2
ATG9A-222	ENST00000488833	SELENOK	Q9Y6D0	94 aa		13.8	□□□□□ -0.2
ATG9A-222	ENST00000488833	MFSD2B	A6NFX1	497 aa		13.79	□□□□□ -0.2
ATG9A-222	ENST00000488833	CGB1	A6NKQ9	187 aa		13.79	□□□□□ -0.2
ATG9A-222	ENST00000488833	TAS2R31	P59538	309 aa		13.79	□□□□□ -0.2
ATG9A-222	ENST00000488833	FAM106A	Q4KMX7	169 aa		13.79	□□□□□ -0.2
ATG9A-222	ENST00000488833	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.79	□□□□□ -0.2
ATG9A-222	ENST00000488833	OR51H1	Q8NH63	302 aa		13.79	□□□□□ -0.2
ATG9A-222	ENST00000488833	HIPK2	Q9H2X6	1198 aa		13.79	□□□□□ -0.2
ATG9A-222	ENST00000488833	IFT46	Q9NQC8	304 aa		13.79	□□□□□ -0.2
ATG9A-222	ENST00000488833	IGLV11-55	A0A075B6I3	123 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	ZNF320	A2RRD8	509 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	TMEM213	A2RRL7	107 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	OR11H12	B2RN74	326 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	HPRT1	P00492	218 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	NQO2	P16083	231 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	CBLN1	P23435	193 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	OR2B8P	P59922	312 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	HERV-K104	P61576	105 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	KLK9	Q2XQG4	91 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	AADACL3	Q5VUY0	350 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	ZNF818P	Q6ZRF7	136 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	OR5AP2	Q8NGF4	316 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	KLK9	Q9UKQ9	250 aa		13.78	□□□□□ -0.2
ATG9A-222	ENST00000488833	TRBV7-1	A0A0A6YYK4	115 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	TRAV3	A0A0B4J244	114 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	IGLC7	A0M8Q6	106 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	RBMY1B	A6NDE4	496 aa	Known RBP	13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	RBMY1E	A6NEQ0	496 aa	Known RBP	13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833		A8MWP6	167 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	UPK2	O00526	184 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	S1PR2	O95136	353 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	RBMY1D	P0C7P1	496 aa	Known RBP	13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	POU2AF1	Q16633	256 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	ZNF57	Q68EA5	555 aa	Predicted RBP	13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	DMBX1	Q8NFW5	382 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	GIMAP1	Q8WWP7	306 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	CXorf58	Q96LI9	332 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	COMMD5	Q9GZQ3	224 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	TMEM140	Q9NV12	185 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	EHF	Q9NZC4	300 aa		13.77	□□□□□ -0.21
ATG9A-222	ENST00000488833	RPA2	P15927	270 aa		13.76	□□□□□ -0.21
ATG9A-222	ENST00000488833	GPR183	P32249	361 aa		13.76	□□□□□ -0.21
ATG9A-222	ENST00000488833	TGFBR1	P36897	503 aa		13.76	□□□□□ -0.21
ATG9A-222	ENST00000488833	KCTD21	Q4G0X4	260 aa		13.76	□□□□□ -0.21
ATG9A-222	ENST00000488833	SLC16A13	Q7RTY0	426 aa		13.76	□□□□□ -0.21
ATG9A-222	ENST00000488833	TMEM61	Q8N0U2	210 aa		13.76	□□□□□ -0.21
ATG9A-222	ENST00000488833	QTRT1	Q9BXR0	403 aa	Known RBP	13.76	□□□□□ -0.21
ATG9A-222	ENST00000488833	COMMD9	Q9P000	198 aa		13.76	□□□□□ -0.21
ATG9A-222	ENST00000488833	MLX	Q9UH92	298 aa		13.76	□□□□□ -0.21
ATG9A-222	ENST00000488833	ALMS1	Q8TCU4	4167 aa		13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	XRCC3	O43542	346 aa		13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	TMEM127	O75204	238 aa		13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	CLEC3B	P05452	202 aa		13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	ERVK-16	P61578	105 aa		13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	BTNL8	Q6UX41	500 aa		13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	UXS1	Q8NBZ7	420 aa		13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	CD300LF	Q8TDQ1	290 aa		13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	BORCS5	Q969J3	196 aa		13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	SRSF8	Q9BRL6	282 aa	Known RBP	13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	PLEKHA2	Q9HB19	425 aa		13.75	□□□□□ -0.21
ATG9A-222	ENST00000488833	RLN1	P04808	185 aa		13.74	□□□□□ -0.21
ATG9A-222	ENST00000488833	UBE2NL	Q5JXB2	153 aa		13.74	□□□□□ -0.21
ATG9A-222	ENST00000488833	CROCCP3	Q8IVE0	287 aa		13.74	□□□□□ -0.21
ATG9A-222	ENST00000488833	OR10W1	Q8NGF6	305 aa		13.74	□□□□□ -0.21
ATG9A-222	ENST00000488833	OR52B4	Q8NGK2	314 aa		13.74	□□□□□ -0.21
ATG9A-222	ENST00000488833	ZNF502	Q8TBZ5	544 aa		13.74	□□□□□ -0.21
ATG9A-222	ENST00000488833	S100A16	Q96FQ6	103 aa	Known RBP	13.74	□□□□□ -0.21
ATG9A-222	ENST00000488833	THYN1	Q9P016	225 aa		13.74	□□□□□ -0.21
ATG9A-222	ENST00000488833	IGHV3-35	A0A0C4DH35	117 aa		13.73	□□□□□ -0.21
ATG9A-222	ENST00000488833	SCAF4	O95104	1147 aa	Known RBP	13.73	□□□□□ -0.21
ATG9A-222	ENST00000488833	FGF2	P09038	288 aa		13.73	□□□□□ -0.21
ATG9A-222	ENST00000488833	GNRHR	P30968	328 aa		13.73	□□□□□ -0.21
ATG9A-222	ENST00000488833	RFX2	P48378	723 aa		13.73	□□□□□ -0.21
ATG9A-222	ENST00000488833	TM4SF20	Q53R12	229 aa		13.73	□□□□□ -0.21
ATG9A-222	ENST00000488833	TMEM69	Q5SWH9	247 aa		13.73	□□□□□ -0.21
ATG9A-222	ENST00000488833	THOC7	Q6I9Y2	204 aa	Known RBP	13.73	□□□□□ -0.21
ATG9A-222	ENST00000488833	UNQ9165/PRO28630	Q6UXU0	137 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms