RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 LDLRAD2Q5SZI1 272 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 STX12Q86Y82 276 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 C5orf30Q96GV9 206 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 AJUBAQ96IF1 538 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 GNG12Q9UBI6 72 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 MMP24Q9Y5R2 645 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 SYNGR2O43760 224 aa15.64■□□□□ 0.09
CCM2-216ENST00000488727 DFFBO76075 338 aa15.64■□□□□ 0.09
CCM2-216ENST00000488727 SNAPINO95295 136 aa15.64■□□□□ 0.09
CCM2-216ENST00000488727 IGLV1-47P01700 117 aa15.64■□□□□ 0.09
CCM2-216ENST00000488727 ARG1P05089 322 aa15.64■□□□□ 0.09
CCM2-216ENST00000488727 GNG10P50151 68 aa15.64■□□□□ 0.09
CCM2-216ENST00000488727 SULT1A1P50225 295 aa15.64■□□□□ 0.09
CCM2-216ENST00000488727 BPIFB3P59826 476 aa15.64■□□□□ 0.09
CCM2-216ENST00000488727 TMEM182Q6ZP80 229 aaPredicted RBP15.64■□□□□ 0.09
CCM2-216ENST00000488727 LFNGQ8NES3 379 aa15.64■□□□□ 0.09
CCM2-216ENST00000488727 JPT1Q9UK76 154 aa15.64■□□□□ 0.09
CCM2-216ENST00000488727 A0A0U1RQK1 487 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 A0A1W2PPE3 182 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 FAM74A7A6NL05 159 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 CST7O76096 145 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 SFTA3P0C7M3 94 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 P0C879 139 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 PPP1CCP36873 323 aaKnown RBP15.63■□□□□ 0.09
CCM2-216ENST00000488727 ZNF616Q08AN1 781 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 TMEM30BQ3MIR4 351 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 FAM74A3Q4VXF1 159 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 LHFPL4Q7Z7J7 247 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 OR4P4Q8NGL7 312 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 OR9G1Q8NH87 305 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 SCRT1Q9BWW7 348 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 A0A1B0GW64 132 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 TOR1AO14656 332 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 NXPH3O95157 252 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 PRH1P02810 166 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 MORN2Q502X0 79 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 ZNF66Q6ZN08 573 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 ZNF439Q8NDP4 499 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 OR2G3Q8NGZ4 309 aa15.63■□□□□ 0.09
CCM2-216ENST00000488727 MDFIC2A0A1B0GVS7 189 aa15.62■□□□□ 0.09
CCM2-216ENST00000488727 J3QR06 171 aa15.62■□□□□ 0.09
CCM2-216ENST00000488727 AGPAT2O15120 278 aa15.62■□□□□ 0.09
CCM2-216ENST00000488727 SLC31A2O15432 143 aa15.62■□□□□ 0.09
CCM2-216ENST00000488727 ZNF134P52741 427 aa15.62■□□□□ 0.09
CCM2-216ENST00000488727 PEA15Q15121 130 aa15.62■□□□□ 0.09
CCM2-216ENST00000488727 IZUMO4Q1ZYL8 232 aa15.62■□□□□ 0.09
CCM2-216ENST00000488727 HLA-DRB5Q30154 266 aa15.62■□□□□ 0.09
CCM2-216ENST00000488727 BEND2Q8NDZ0 799 aa15.62■□□□□ 0.09
CCM2-216ENST00000488727 ZNF48Q96MX3 618 aaPredicted RBP15.62■□□□□ 0.09
CCM2-216ENST00000488727 PAX6P26367 422 aa15.61■□□□□ 0.09
CCM2-216ENST00000488727 FHITP49789 147 aa15.61■□□□□ 0.09
CCM2-216ENST00000488727 RPL30P62888 115 aaKnown RBP15.61■□□□□ 0.09
CCM2-216ENST00000488727 DHRS7BQ6IAN0 325 aaPredicted RBP15.61■□□□□ 0.09
CCM2-216ENST00000488727 ZNF596Q8TC21 504 aa15.61■□□□□ 0.09
CCM2-216ENST00000488727 HIPK2Q9H2X6 1198 aa15.61■□□□□ 0.09
CCM2-216ENST00000488727 RNF150Q9ULK6 438 aa15.61■□□□□ 0.09
CCM2-216ENST00000488727 C9JQL5 133 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 YPEL1O60688 119 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 LGALS4P56470 323 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 GUK1Q16774 197 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 DEFB112Q30KQ8 113 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 Q3ZCU0 254 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 CT45A1Q5HYN5 189 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 DPPA3Q6W0C5 159 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 DYNAPQ8N1N2 210 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 CT45A3Q8NHU0 189 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 FAM213BQ8TBF2 198 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 YPEL2Q96QA6 119 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 PSENENQ9NZ42 101 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 SETD2Q9BYW2 2564 aaPredicted RBP15.6■□□□□ 0.09
CCM2-216ENST00000488727 NUPL2O15504 423 aaKnown RBP15.6■□□□□ 0.09
CCM2-216ENST00000488727 PRRX1P54821 245 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 SLC25A48Q6ZT89 311 aaKnown RBP15.6■□□□□ 0.09
CCM2-216ENST00000488727 TMEM217Q8N7C4 229 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 C8orf31Q8N9H6 132 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 CLRN3Q8NCR9 226 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 EDARADDQ8WWZ3 215 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 HSD17B10Q99714 261 aaKnown RBP15.6■□□□□ 0.09
CCM2-216ENST00000488727 PBDC1Q9BVG4 233 aa15.6■□□□□ 0.09
CCM2-216ENST00000488727 TBL2Q9Y4P3 447 aaKnown RBP15.6■□□□□ 0.09
CCM2-216ENST00000488727 NF1P21359 2839 aa15.59■□□□□ 0.09
CCM2-216ENST00000488727 BTBD17A6NE02 478 aa15.59■□□□□ 0.09
CCM2-216ENST00000488727 BUB1B-PAK6H3BSN5 160 aa15.59■□□□□ 0.09
CCM2-216ENST00000488727 ATF4P18848 351 aaPredicted RBP15.59■□□□□ 0.09
CCM2-216ENST00000488727 LINC00311Q8N616 119 aa15.59■□□□□ 0.09
CCM2-216ENST00000488727 AGMATQ9BSE5 352 aa15.59■□□□□ 0.09
CCM2-216ENST00000488727 PARD6GQ9BYG4 376 aaPredicted RBP15.59■□□□□ 0.09
CCM2-216ENST00000488727 SMDT1Q9H4I9 107 aa15.59■□□□□ 0.09
CCM2-216ENST00000488727 HSPB7Q9UBY9 170 aa15.59■□□□□ 0.09
CCM2-216ENST00000488727 RAB29O14966 203 aa15.58■□□□□ 0.08
CCM2-216ENST00000488727 RAMP3O60896 148 aa15.58■□□□□ 0.08
CCM2-216ENST00000488727 IFNA5P01569 189 aa15.58■□□□□ 0.08
CCM2-216ENST00000488727 H2AFB1P0C5Y9 115 aa15.58■□□□□ 0.08
CCM2-216ENST00000488727 OR8U8P0C7N1 319 aa15.58■□□□□ 0.08
CCM2-216ENST00000488727 HTR1DP28221 377 aa15.58■□□□□ 0.08
CCM2-216ENST00000488727 NPBWR1P48145 328 aa15.58■□□□□ 0.08
CCM2-216ENST00000488727 BRWD1-AS2P59051 145 aa15.58■□□□□ 0.08
CCM2-216ENST00000488727 TMEM267Q0VDI3 215 aaPredicted RBP15.58■□□□□ 0.08
CCM2-216ENST00000488727 SCGB2A2Q13296 93 aa15.58■□□□□ 0.08
CCM2-216ENST00000488727 TCTEX1D2Q8WW35 142 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms