RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-208	ENST00000488536	MRPL20	Q9BYC9	149 aa	Known RBP	11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	GNG13	Q9P2W3	67 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	RFNG	Q9Y644	331 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	TLN1	Q9Y490	2541 aa	Known RBP	11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	MAP1B	P46821	2468 aa	Known RBP	11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	LOC400499	M0QZD8	3231 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	TRAV3	A0A0B4J244	114 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	C7orf77	A4D0Y5	90 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	CXorf65	A6NEN9	183 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	TMEM250	H0YL14	139 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536		M0R036	132 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	SIAH2	O43255	324 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	FCN3	O75636	299 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	FOLR2	P14207	255 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	ELL	P55199	621 aa	Predicted RBP	11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	BSX	Q3C1V8	233 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	RNF212	Q495C1	297 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	AWAT1	Q58HT5	328 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	C11orf71	Q6IPW1	123 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	ACSM6	Q6P461	480 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	LCN15	Q6UWW0	184 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	ZNF841	Q6ZN19	808 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	VKORC1L1	Q8N0U8	176 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	RXFP4	Q8TDU9	374 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	CACNG8	Q8WXS5	425 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	TVP23C	Q96ET8	276 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	COMMD5	Q9GZQ3	224 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	RPS10P5	Q9NQ39	176 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	SIRT7	Q9NRC8	400 aa		11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	LSM4	Q9Y4Z0	139 aa	Known RBP	11.44	□□□□□ -0.58
UBA7-208	ENST00000488536	RRH	O14718	337 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	SAA1	P0DJI8	122 aa	Predicted RBP	11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	OR13C7	P0DN81	318 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	MAS1L	P35410	378 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	CDC34	P49427	236 aa	Predicted RBP	11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	SUB1	P53999	127 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	ERVFRD-1	P60508	538 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	RPL8	P62917	257 aa	Known RBP	11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	ERH	P84090	104 aa	Known RBP	11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	UTF1	Q5T230	341 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	TEPP	Q6URK8	271 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	TREML4	Q6UXN2	200 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	LY6G5B	Q8NDX9	201 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	NANP	Q8TBE9	248 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	C19orf24	Q9BVV8	132 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	CLEC7A	Q9BXN2	247 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	VSIR	Q9H7M9	311 aa		11.43	□□□□□ -0.58
UBA7-208	ENST00000488536	ZFHX4	Q86UP3	3567 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	TEX50	A0A1B0GTY4	177 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536		A0A1B0GV50	99 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	MED19	A0JLT2	244 aa	Predicted RBP	11.42	□□□□□ -0.58
UBA7-208	ENST00000488536		H3BQ15	152 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	NUPL2	O15504	423 aa	Known RBP	11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	F12	P00748	615 aa	Predicted RBP	11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	MT-ND4L	P03901	98 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	IGKV1-16	P04430	117 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	LIPF	P07098	398 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	COL8A2	P25067	703 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	GRN	P28799	593 aa	Known RBP	11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	GPX4	P36969	197 aa	Predicted RBP	11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	RPL29	P47914	159 aa	Known RBP	11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	SPINK9	Q5DT21	86 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	TMEM88	Q6PEY1	159 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	CBLN2	Q8IUK8	224 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	C11orf42	Q8N5U0	333 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	TEX45	Q8NA69	505 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	CHODL	Q9H9P2	273 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	NDUFA4L2	Q9NRX3	87 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	MGA	Q8IWI9	3026 aa		11.42	□□□□□ -0.58
UBA7-208	ENST00000488536	PPIAL4C	A0A0B4J2A2	164 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536		A0A1W2PPV4	95 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536		M0R1W7	72 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	CA2	P00918	260 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	IGLV1-47	P01700	117 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	PPIAL4G	P0DN37	164 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	RPS16	P62249	146 aa	Known RBP	11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	MEF2B	Q02080	365 aa	Predicted RBP	11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	SSX2	Q16385	188 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	HLA-DRB5	Q30154	266 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	AVPI1	Q5T686	147 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	WDR25	Q64LD2	544 aa	Predicted RBP	11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	FAM122C	Q6P4D5	195 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	TMEM144	Q7Z5S9	345 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	PNKD	Q8N490	385 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536		Q8N7P7	452 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	CYB561D1	Q8N8Q1	229 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	RAB24	Q969Q5	203 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	SLC35E1	Q96K37	410 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	GGTLC1	Q9BX51	225 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	TMEM242	Q9NWH2	141 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	SPTBN2	O15020	2390 aa		11.41	□□□□□ -0.58
UBA7-208	ENST00000488536	CELSR3	Q9NYQ7	3312 aa		11.4	□□□□□ -0.58
UBA7-208	ENST00000488536	IGHV2-26	A0A0B4J1V2	119 aa		11.4	□□□□□ -0.58
UBA7-208	ENST00000488536	ZFP92	A6NM28	416 aa		11.4	□□□□□ -0.58
UBA7-208	ENST00000488536	SRRM4	A7MD48	611 aa	Known RBP	11.4	□□□□□ -0.58
UBA7-208	ENST00000488536	DLL1	O00548	723 aa		11.4	□□□□□ -0.58
UBA7-208	ENST00000488536	MT-CO2	P00403	227 aa		11.4	□□□□□ -0.58
UBA7-208	ENST00000488536	IGKV1D-33	P01593	117 aa		11.4	□□□□□ -0.58
UBA7-208	ENST00000488536	IGKV1-33	P01594	117 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms