RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 BTF3P20290 206 aaKnown RBP10.08□□□□□ -0.8
COL3A1-206ENST00000487010 PRDX2P32119 198 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 ARG2P78540 354 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 RPL39P5Q59GN2 51 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 TEPPQ6URK8 271 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 MMD2Q8IY49 270 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 FAM216AQ8WUB2 273 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 S1PR3Q99500 378 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 OPN3Q9H1Y3 402 aaPredicted RBP10.08□□□□□ -0.8
COL3A1-206ENST00000487010 MSL2Q9HCI7 577 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 V9GYV3 84 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 TRBV9A0A0B4J1U6 114 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 SNURFLB1AK76 121 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 F2Z2F3 143 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 AGFG2O95081 481 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 FRMD6-AS1P0C7T7 363 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 IRF2P14316 349 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 VN1R17PQ8TDU5 208 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 LRRC29Q8WV35 223 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 LRFN3Q9BTN0 628 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 VAMP8Q9BV40 100 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 GNB1LQ9BYB4 327 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 IL17BQ9UHF5 180 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 FZR1Q9UM11 496 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 PAM16Q9Y3D7 125 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 VPS13AQ96RL7 3174 aa10.07□□□□□ -0.8
COL3A1-206ENST00000487010 IGKV3-15P01624 115 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 COL8A2P25067 703 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 KIR2DS2P43631 304 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 COMPP49747 757 aaPredicted RBP10.06□□□□□ -0.8
COL3A1-206ENST00000487010 TNFSF10P50591 281 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 ZNF134P52741 427 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 RAB31Q13636 194 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 Q6ZT83 130 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 LRP11Q86VZ4 500 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 GCNT2Q8N0V5 402 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 OR4P4Q8NGL7 312 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 TMEM208Q9BTX3 173 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 SAMD10Q9BYL1 202 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 C15orf61A6NNL5 157 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 DLEU1O43261 78 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 CGAP01215 116 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 FABP6P51161 128 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 LOXL3P58215 753 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 OR5I1Q13606 314 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 CR1LQ2VPA4 569 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 OR8I2Q8N0Y5 310 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 DDB2Q92466 427 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 IFI27L2Q9H2X8 130 aa10.06□□□□□ -0.8
COL3A1-206ENST00000487010 A6NNC1 897 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 IGHV3-13P01766 116 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 IGHV3-7P01780 117 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 OR10J4P0C629 311 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 NPY1RP25929 384 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 PRR20EP86478 221 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 PRR20CP86479 221 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 PRR20DP86480 221 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 PRR20BP86481 221 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 PRR20AP86496 221 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 TMEM164Q5U3C3 297 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 C1orf210Q8IVY1 113 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 ST6GALNAC3Q8NDV1 305 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 SLC24A4Q8NFF2 622 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 SFXN3Q9BWM7 321 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 PRO3102Q9H379 93 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 GNB4Q9HAV0 340 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 ARL2-SNX15V9GYD0 113 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 IGKV1D-17A0A075B6S4 117 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 HELTA6NFD8 242 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 F2RL2O00254 374 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 GPX1P07203 203 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 LINC00869P0C866 280 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 IGFBP2P18065 325 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 BRS3P32247 399 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 GAGE1Q13065 139 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 CENPWQ5EE01 88 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 CYB5R2Q6BCY4 276 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 C1orf229Q6ZS94 237 aaPredicted RBP10.05□□□□□ -0.8
COL3A1-206ENST00000487010 MIR17HGQ75NE6 70 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 FAM214BQ7L5A3 538 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 SIGLECL1Q8N7X8 197 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 OR4S2Q8NH73 311 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 FER1L6-AS2Q96M78 137 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 TUBG2Q9NRH3 451 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 CLCF1Q9UBD9 225 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 SLC25A10Q9UBX3 287 aaPredicted RBP10.05□□□□□ -0.8
COL3A1-206ENST00000487010 DUSP13Q9UII6 198 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 FBXL7Q9UJT9 491 aa10.05□□□□□ -0.8
COL3A1-206ENST00000487010 FOXA2Q9Y261 457 aaPredicted RBP10.05□□□□□ -0.8
COL3A1-206ENST00000487010 FAM186AA6NE01 2351 aa10.04□□□□□ -0.8
COL3A1-206ENST00000487010 MGST3O14880 152 aa10.04□□□□□ -0.8
COL3A1-206ENST00000487010 CA2P00918 260 aa10.04□□□□□ -0.8
COL3A1-206ENST00000487010 HOXC12P31275 282 aa10.04□□□□□ -0.8
COL3A1-206ENST00000487010 GNG4P50150 75 aa10.04□□□□□ -0.8
COL3A1-206ENST00000487010 HSPE1P61604 102 aaKnown RBP10.04□□□□□ -0.8
COL3A1-206ENST00000487010 CX3CL1P78423 397 aa10.04□□□□□ -0.8
COL3A1-206ENST00000487010 NEUROG1Q92886 237 aa10.04□□□□□ -0.8
COL3A1-206ENST00000487010 TMEM14BQ9NUH8 114 aa10.04□□□□□ -0.8
COL3A1-206ENST00000487010 GOLT1BQ9Y3E0 138 aa10.04□□□□□ -0.8
COL3A1-206ENST00000487010 RNF114Q9Y508 228 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms