RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 Q6ZPA2 131 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 ZNF114Q8NC26 417 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 SSBP3Q9BWW4 388 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 M0R1X1 148 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 TOX4O94842 621 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 SRIP30626 198 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 MAS1LP35410 378 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 GNG4P50150 75 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 B3GALT5-AS1P59052 145 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 SAPCD1Q5SSQ6 148 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 RIPPLY2Q5TAB7 128 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 HAPLN4Q86UW8 402 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 ABHD12Q8N2K0 398 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 MIEN1Q9BRT3 115 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 F2Z2F3 143 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 GPR12P47775 334 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 RPL31P62899 125 aaKnown RBP10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 PSG5Q15238 335 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 RPEL1Q2QD12 228 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 ACTL10Q5JWF8 245 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 SCCPDHQ8NBX0 429 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 WIPI2Q9Y4P8 454 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 CTSSP25774 331 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 GNB1P62873 340 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 RNPS1Q15287 305 aaKnown RBP10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 UNQ5815/PRO19632Q6UWF5 114 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 LINC01551Q86U37 167 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 FAM216AQ8WUB2 273 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 DECR2Q9NUI1 292 aa10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 RALYQ9UKM9 306 aaKnown RBP10.37□□□□□ -0.75
SHROOM3-208ENST00000486758 SSTR5P35346 364 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 SSC4DQ8WTU2 575 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 OR5P3Q8WZ94 311 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 HSD17B10Q99714 261 aaKnown RBP10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 REPIN1Q9BWE0 567 aaKnown RBP10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 PLSCR2Q9NRY7 297 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 TMEM238LA0A1B0GVL6 79 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 C17orf98A8MV24 154 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 DNPH1O43598 174 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 HAND1O96004 215 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 LHX2P50458 406 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 LCN12Q6JVE5 192 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 OCC1Q8TAD7 63 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 LRRC29Q8WV35 223 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 QTRT1Q9BXR0 403 aaKnown RBP10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 NTN3O00634 580 aaPredicted RBP10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 PDE6DO43924 150 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 IL18BPO95998 194 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 CA1P00915 261 aaPredicted RBP10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 SELENOVP59797 346 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 FAM201AQ5SY85 155 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 AP1S3Q96PC3 154 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 PXMP4Q9Y6I8 212 aa10.36□□□□□ -0.75
SHROOM3-208ENST00000486758 OR5B21A6NL26 309 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 J3QT63 122 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 SPINT2O43291 252 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 BRS3P32247 399 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 CLDN18P56856 261 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 TRIP6Q15654 476 aaKnown RBP10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 PQLC2Q6ZP29 291 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 ODF3L1Q8IXM7 274 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 TPPP3Q9BW30 176 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 TNCP24821 2201 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 TRAV1-1A0A0B4J248 108 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 TRAV24A0A0B4J272 114 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 IGKV1-39P01597 117 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 IGKV1D-39P04432 117 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 TRAT1Q6PIZ9 186 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 MMD2Q8IY49 270 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 SLC24A4Q8NFF2 622 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 RNASEH2CQ8TDP1 164 aaKnown RBP10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 R3HDM4Q96D70 268 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 SLC35E1Q96K37 410 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 RNASE7Q9H1E1 156 aaKnown RBP10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 MPC1Q9Y5U8 109 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 LRP4O75096 1905 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 NAV2Q8IVL1 2488 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 PRB4P10163 310 aaPredicted RBP10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 CRYBB3P26998 211 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 Q6ZWC4 215 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 C1QTNF5Q9BXJ0 243 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 PRDM14Q9GZV8 571 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 BET1LQ9NYM9 111 aa10.35□□□□□ -0.75
SHROOM3-208ENST00000486758 KLHDC1Q8N7A1 406 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 TMEM30CPA0ZSE6 113 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 M0R2Z0 102 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 RBFOX2O43251 390 aaKnown RBP eCLIP10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 IGHV3-48P01763 117 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 STUMQ69YW2 141 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 VWA1Q6PCB0 445 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 TCTEX1D1Q8N7M0 179 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 LRRC30A6NM36 301 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 HSBP1L1C9JCN9 74 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 PAFAH1B2P68402 229 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 ATG2AQ2TAZ0 1938 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 ZNF718Q3SXZ3 478 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 ZNF324BQ6AW86 544 aaPredicted RBP10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 ABLIM2Q6H8Q1 611 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 OR5B3Q8NH48 314 aa10.34□□□□□ -0.75
SHROOM3-208ENST00000486758 CEP192Q8TEP8 1941 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms