RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 SPIN2BQ9BPZ2 258 aa13.11□□□□□ -0.31
THBS3-207ENST00000486260 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.11□□□□□ -0.31
THBS3-207ENST00000486260 GSKIPQ9P0R6 139 aa13.11□□□□□ -0.31
THBS3-207ENST00000486260 PLXNB1O43157 2135 aa13.11□□□□□ -0.31
THBS3-207ENST00000486260 TNCP24821 2201 aa13.11□□□□□ -0.31
THBS3-207ENST00000486260 C15orf61A6NNL5 157 aa13.1□□□□□ -0.31
THBS3-207ENST00000486260 HLA-DRB1P01911 266 aa13.1□□□□□ -0.31
THBS3-207ENST00000486260 SLC25A6P12236 298 aa13.1□□□□□ -0.31
THBS3-207ENST00000486260 SSBP2P81877 361 aaPredicted RBP13.1□□□□□ -0.31
THBS3-207ENST00000486260 TNXAQ16473 311 aa13.1□□□□□ -0.31
THBS3-207ENST00000486260 OR1S1Q8NH92 325 aa13.1□□□□□ -0.31
THBS3-207ENST00000486260 WDR89Q96FK6 387 aaPredicted RBP13.1□□□□□ -0.31
THBS3-207ENST00000486260 C2orf50Q96LR7 162 aa13.1□□□□□ -0.31
THBS3-207ENST00000486260 HSPB9Q9BQS6 159 aa13.1□□□□□ -0.31
THBS3-207ENST00000486260 TMEM14BQ9NUH8 114 aa13.1□□□□□ -0.31
THBS3-207ENST00000486260 PRNDQ9UKY0 176 aa13.1□□□□□ -0.31
THBS3-207ENST00000486260 FOXA2Q9Y261 457 aaPredicted RBP13.1□□□□□ -0.31
THBS3-207ENST00000486260 HMX3A6NHT5 357 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 ST8SIA3O43173 380 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 TCF21O43680 179 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 PITX3O75364 302 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 C10orf55Q5SWW7 151 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 Q6ZS46 218 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 FOXRED2Q8IWF2 684 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 JMJD8Q96S16 334 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 PDCD10Q9BUL8 212 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 COA4Q9NYJ1 87 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 OR51B2Q9Y5P1 312 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 IGHV7-81A0A0B4J1V7 117 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 TEX50A0A1B0GTY4 177 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 FAM181BA6NEQ2 426 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 E7EUB6 86 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 ACTL6BO94805 426 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 CNIH1O95406 144 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 RNASE1P07998 156 aaKnown RBP13.09□□□□□ -0.31
THBS3-207ENST00000486260 UBA52P62987 128 aaKnown RBP13.09□□□□□ -0.31
THBS3-207ENST00000486260 CX3CL1P78423 397 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 CXorf66Q5JRM2 361 aaPredicted RBP13.09□□□□□ -0.31
THBS3-207ENST00000486260 C9orf152Q5JTZ5 239 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 ZNF562Q6V9R5 426 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 CHAC2Q8WUX2 184 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 COMMD5Q9GZQ3 224 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 FKBP11Q9NYL4 201 aa13.09□□□□□ -0.31
THBS3-207ENST00000486260 LINC01548A6NM66 108 aa13.08□□□□□ -0.32
THBS3-207ENST00000486260 MAS1LP35410 378 aa13.08□□□□□ -0.32
THBS3-207ENST00000486260 COMPP49747 757 aaPredicted RBP13.08□□□□□ -0.32
THBS3-207ENST00000486260 NDPQ00604 133 aa13.08□□□□□ -0.32
THBS3-207ENST00000486260 FXYD3Q14802 87 aa13.08□□□□□ -0.32
THBS3-207ENST00000486260 ZNF429Q86V71 674 aa13.08□□□□□ -0.32
THBS3-207ENST00000486260 OR4D5Q8NGN0 318 aa13.08□□□□□ -0.32
THBS3-207ENST00000486260 TET2Q6N021 2002 aaPredicted RBP13.08□□□□□ -0.32
THBS3-207ENST00000486260 IFNA17P01571 189 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 FGF2P09038 288 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 HSPE1P61604 102 aaKnown RBP13.07□□□□□ -0.32
THBS3-207ENST00000486260 AARDQ4LEZ3 155 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 SPINK9Q5DT21 86 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 HINT2Q9BX68 163 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 ZNF436Q9C0F3 470 aaPredicted RBP13.07□□□□□ -0.32
THBS3-207ENST00000486260 NPFFR1Q9GZQ6 430 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 A0A1B0GW64 132 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 TRIM77I1YAP6 450 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 SCGB1D2O95969 90 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 RPL27AP46776 148 aaKnown RBP13.07□□□□□ -0.32
THBS3-207ENST00000486260 SRSF2Q01130 221 aaKnown RBP13.07□□□□□ -0.32
THBS3-207ENST00000486260 OR1L8Q8NGR8 309 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 GRPEL2Q8TAA5 225 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 SRSF12Q8WXF0 261 aaKnown RBP13.07□□□□□ -0.32
THBS3-207ENST00000486260 TAF15Q92804 592 aaKnown RBP eCLIP13.07□□□□□ -0.32
THBS3-207ENST00000486260 FYTTD1Q96QD9 318 aaKnown RBP13.07□□□□□ -0.32
THBS3-207ENST00000486260 FAM103A1Q9BTL3 118 aaKnown RBP13.07□□□□□ -0.32
THBS3-207ENST00000486260 ZNF257Q9Y2Q1 563 aa13.07□□□□□ -0.32
THBS3-207ENST00000486260 CGB1A6NKQ9 187 aa13.06□□□□□ -0.32
THBS3-207ENST00000486260 NKX2-1P43699 371 aaPredicted RBP13.06□□□□□ -0.32
THBS3-207ENST00000486260 EIF2B2P49770 351 aaKnown RBP13.06□□□□□ -0.32
THBS3-207ENST00000486260 CD83Q01151 205 aa13.06□□□□□ -0.32
THBS3-207ENST00000486260 TNFRSF9Q07011 255 aa13.06□□□□□ -0.32
THBS3-207ENST00000486260 IL15RAQ13261 267 aa13.06□□□□□ -0.32
THBS3-207ENST00000486260 OR5B3Q8NH48 314 aa13.06□□□□□ -0.32
THBS3-207ENST00000486260 ARPC1AQ92747 370 aa13.06□□□□□ -0.32
THBS3-207ENST00000486260 NMES1Q9C002 83 aa13.06□□□□□ -0.32
THBS3-207ENST00000486260 MAGT1Q9H0U3 335 aa13.06□□□□□ -0.32
THBS3-207ENST00000486260 HSPB7Q9UBY9 170 aa13.06□□□□□ -0.32
THBS3-207ENST00000486260 MSGN1A6NI15 193 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 IGHG2P01859 326 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 APELAP0DMC3 54 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 SPCS3P61009 180 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 ID3Q02535 119 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 SRSF4Q08170 494 aaKnown RBP13.05□□□□□ -0.32
THBS3-207ENST00000486260 OR52E5Q8NH55 327 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 ABHD5Q8WTS1 349 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 PRSS22Q9GZN4 317 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 PARP11Q9NR21 331 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 NDUFA4L2Q9NRX3 87 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 FBXO7Q9Y3I1 522 aa13.05□□□□□ -0.32
THBS3-207ENST00000486260 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
THBS3-207ENST00000486260 ATP6V0E1O15342 81 aa13.04□□□□□ -0.32
THBS3-207ENST00000486260 MBPP02686 304 aaPredicted RBP13.04□□□□□ -0.32
THBS3-207ENST00000486260 TRAPPC2P0DI81 140 aa13.04□□□□□ -0.32
THBS3-207ENST00000486260 TRAPPC2BP0DI82 140 aa13.04□□□□□ -0.32
THBS3-207ENST00000486260 EGR2P11161 476 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms