RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 COMMD9Q9P000 198 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 C3orf84H3BNL1 204 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 HRASP01112 189 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 SERPINE2P07093 398 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 NQO2P16083 231 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 G6PCP35575 357 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 MYCNOSP40205 109 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 PLGLAQ15195 96 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 VMA21Q3ZAQ7 101 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 TMEM128Q5BJH2 165 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 LIN54Q6MZP7 749 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 PUSL1Q8N0Z8 303 aaKnown RBP13.75□□□□□ -0.21
MCF2L-226ENST00000486210 TEX45Q8NA69 505 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 KLHL30-AS1Q8NEE0 82 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 DUSP18Q8NEJ0 188 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 RHOVQ96L33 236 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 NOL4LQ96MY1 436 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-226ENST00000486210 GON7Q9BXV9 100 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 TMEM222Q9H0R3 208 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 PALMDQ9NP74 551 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 NUBP2Q9Y5Y2 271 aa13.75□□□□□ -0.21
MCF2L-226ENST00000486210 DNAH1Q9P2D7 4330 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 TRAV3A0A0B4J244 114 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 SFT2D2O95562 160 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 KRASP01116 189 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 H2AFB2P0C5Z0 115 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 RAB25P57735 213 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 POU2AF1Q16633 256 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 TRIM16LQ309B1 348 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 OR4A47Q6IF82 309 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 C8orf86Q6ZUL3 223 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 SELENOHQ8IZQ5 122 aaKnown RBP13.74□□□□□ -0.21
MCF2L-226ENST00000486210 SEC22AQ96IW7 307 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 KCNIP3Q9Y2W7 256 aa13.74□□□□□ -0.21
MCF2L-226ENST00000486210 LSM4Q9Y4Z0 139 aaKnown RBP13.74□□□□□ -0.21
MCF2L-226ENST00000486210 LYSTQ99698 3801 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 IGHV7-81A0A0B4J1V7 117 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 C9orf170A2RU37 121 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 MARCH11A6NNE9 402 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 AP4M1O00189 453 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 B3GALNT1O75752 331 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 OR2A4O95047 310 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 CDS2O95674 445 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 CA2P00918 260 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 IGKV1-5P01602 117 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 IGHG2P01859 326 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 HLA-DRB1P01911 266 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 IL6RP08887 468 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-226ENST00000486210 OR4E1P0C645 316 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 VAMP1P23763 118 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 SSBP2P81877 361 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-226ENST00000486210 NDPQ00604 133 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 ANKRD55Q3KP44 614 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 TEX38Q6PEX7 206 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 PPP1R27Q86WC6 154 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 STPG2Q8N412 459 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 DMBX1Q8NFW5 382 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 OR52B4Q8NGK2 314 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 CASTOR1Q8WTX7 329 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 OR2A7Q96R45 310 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 TMEM140Q9NV12 185 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 LINC00527Q9UJ94 153 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 TENM2Q9NT68 2774 aa13.73□□□□□ -0.21
MCF2L-226ENST00000486210 A0A0G2JRQ6 117 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 KBTBD11O94819 623 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 OR9G9P0C7N8 305 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 MYOD1P15172 320 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 MECP2P51608 486 aaKnown RBP13.72□□□□□ -0.21
MCF2L-226ENST00000486210 UBE2MP61081 183 aaKnown RBP13.72□□□□□ -0.21
MCF2L-226ENST00000486210 CX3CL1P78423 397 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 PRSS8Q16651 343 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 IZUMO4Q1ZYL8 232 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 CXorf66Q5JRM2 361 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-226ENST00000486210 ZNF695Q8IW36 515 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 TMEM167AQ8TBQ9 72 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 TMEM56Q96MV1 263 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 P2RX4Q99571 388 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 ALX4Q9H161 411 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-226ENST00000486210 ZNF430Q9H8G1 570 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-226ENST00000486210 BET1LQ9NYM9 111 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 TMEM56-RWDD3S4R434 201 aa13.72□□□□□ -0.21
MCF2L-226ENST00000486210 UPK2O00526 184 aa13.71□□□□□ -0.21
MCF2L-226ENST00000486210 ERVK-16P61578 105 aa13.71□□□□□ -0.21
MCF2L-226ENST00000486210 GNB1P62873 340 aa13.71□□□□□ -0.21
MCF2L-226ENST00000486210 DHRS2Q13268 280 aa13.71□□□□□ -0.21
MCF2L-226ENST00000486210 C4orf46Q504U0 113 aa13.71□□□□□ -0.21
MCF2L-226ENST00000486210 TMEM268Q5VZI3 342 aa13.71□□□□□ -0.21
MCF2L-226ENST00000486210 LYG2Q86SG7 212 aa13.71□□□□□ -0.21
MCF2L-226ENST00000486210 SEC22CQ9BRL7 303 aa13.71□□□□□ -0.21
MCF2L-226ENST00000486210 NSG2Q9Y328 171 aa13.71□□□□□ -0.21
MCF2L-226ENST00000486210 FBXO7Q9Y3I1 522 aa13.71□□□□□ -0.21
MCF2L-226ENST00000486210 HLA-AP01891 365 aaKnown RBP13.7□□□□□ -0.22
MCF2L-226ENST00000486210 P0C879 139 aa13.7□□□□□ -0.22
MCF2L-226ENST00000486210 EGR2P11161 476 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-226ENST00000486210 ANXA3P12429 323 aa13.7□□□□□ -0.22
MCF2L-226ENST00000486210 C10orf55Q5SWW7 151 aa13.7□□□□□ -0.22
MCF2L-226ENST00000486210 CASC10Q5T4H9 136 aa13.7□□□□□ -0.22
MCF2L-226ENST00000486210 PLET1Q6UQ28 207 aa13.7□□□□□ -0.22
MCF2L-226ENST00000486210 VSTM2AQ8TAG5 236 aa13.7□□□□□ -0.22
MCF2L-226ENST00000486210 RBPMSQ93062 196 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms