RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 IL22RA2Q969J5 263 aa8.98□□□□□ -0.97
NUP50-216ENST00000486184 FYTTD1Q96QD9 318 aaKnown RBP8.98□□□□□ -0.97
NUP50-216ENST00000486184 SPIN2AQ99865 258 aa8.98□□□□□ -0.97
NUP50-216ENST00000486184 SPIN2BQ9BPZ2 258 aa8.98□□□□□ -0.97
NUP50-216ENST00000486184 FAM103A1Q9BTL3 118 aaKnown RBP8.98□□□□□ -0.97
NUP50-216ENST00000486184 PDCD10Q9BUL8 212 aa8.98□□□□□ -0.97
NUP50-216ENST00000486184 FKBP11Q9NYL4 201 aa8.98□□□□□ -0.97
NUP50-216ENST00000486184 ZNF580Q9UK33 172 aa8.98□□□□□ -0.97
NUP50-216ENST00000486184 PRNDQ9UKY0 176 aa8.98□□□□□ -0.97
NUP50-216ENST00000486184 WSB1Q9Y6I7 421 aa8.98□□□□□ -0.97
NUP50-216ENST00000486184 TET2Q6N021 2002 aaPredicted RBP8.98□□□□□ -0.97
NUP50-216ENST00000486184 FBXO24O75426 580 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 OPN1MWP04001 364 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 FGF2P09038 288 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 OPN1MW2P0DN77 364 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 OPN1MW3P0DN78 364 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 OR2B8PP59922 312 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 NDPQ00604 133 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 DCTN2Q13561 401 aaKnown RBP8.97□□□□□ -0.97
NUP50-216ENST00000486184 KHDC1LQ5JSQ8 128 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 TEX38Q6PEX7 206 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 NRARPQ7Z6K4 114 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 LYG2Q86SG7 212 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 SELENOHQ8IZQ5 122 aaKnown RBP8.97□□□□□ -0.97
NUP50-216ENST00000486184 CADM3Q8N126 398 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 COMMD1Q8N668 190 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 SLC35G3Q8N808 338 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 LFNGQ8NES3 379 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 COQ8AQ8NI60 647 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 TMEM68Q96MH6 324 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 TMEM56Q96MV1 263 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 HINT2Q9BX68 163 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 WNT10AQ9GZT5 417 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 PRR13Q9NZ81 148 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 TMEM56-RWDD3S4R434 201 aa8.97□□□□□ -0.97
NUP50-216ENST00000486184 TNCP24821 2201 aa8.96□□□□□ -0.97
NUP50-216ENST00000486184 TRAV3A0A0B4J244 114 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 A0A0B4J2A0 478 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 A0A1W2PN81 502 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 DUXBA0A1W2PPF3 345 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 C9orf170A2RU37 121 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 MSGN1A6NI15 193 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 C15orf61A6NNL5 157 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 G3V318 75 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 LCE2BO14633 110 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 IGKV1-5P01602 117 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 OR9G9P0C7N8 305 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 CHRNA7P36544 502 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 MECP2P51608 486 aaKnown RBP8.96□□□□□ -0.98
NUP50-216ENST00000486184 DHRS2Q13268 280 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 AKIRIN2Q53H80 203 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 C10orf55Q5SWW7 151 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 THOC7Q6I9Y2 204 aaKnown RBP8.96□□□□□ -0.98
NUP50-216ENST00000486184 TMEM65Q6PI78 240 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 ZNF329Q86UD4 541 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 MRPL41Q8IXM3 137 aaKnown RBP8.96□□□□□ -0.98
NUP50-216ENST00000486184 LHFPL5Q8TAF8 219 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 ZNF747Q9BV97 191 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 ALX4Q9H161 411 aaPredicted RBP8.96□□□□□ -0.98
NUP50-216ENST00000486184 ZNF355PQ9NSJ1 428 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 SHPKQ9UHJ6 478 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 FOXA2Q9Y261 457 aaPredicted RBP8.96□□□□□ -0.98
NUP50-216ENST00000486184 NSG2Q9Y328 171 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 FBXO7Q9Y3I1 522 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 OR51B2Q9Y5P1 312 aa8.96□□□□□ -0.98
NUP50-216ENST00000486184 DUS4LO95620 317 aaKnown RBP8.95□□□□□ -0.98
NUP50-216ENST00000486184 PTTG1O95997 202 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 DHFRP00374 187 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 IL6RP08887 468 aaPredicted RBP8.95□□□□□ -0.98
NUP50-216ENST00000486184 APELAP0DMC3 54 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 PF4V1P10720 104 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 CRIP2P52943 208 aaPredicted RBP8.95□□□□□ -0.98
NUP50-216ENST00000486184 MRGPRG-AS1Q2M3A8 158 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 ANKRD55Q3KP44 614 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 CXorf66Q5JRM2 361 aaPredicted RBP8.95□□□□□ -0.98
NUP50-216ENST00000486184 SHISA2Q6UWI4 295 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 C11orf44Q8N8P7 122 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 DUSP18Q8NEJ0 188 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 OR5M8Q8NGP6 311 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 OR1L8Q8NGR8 309 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 OR5B3Q8NH48 314 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 LSM10Q969L4 123 aaKnown RBP8.95□□□□□ -0.98
NUP50-216ENST00000486184 QTRT1Q9BXR0 403 aaKnown RBP8.95□□□□□ -0.98
NUP50-216ENST00000486184 GPN1Q9HCN4 374 aaPredicted RBP8.95□□□□□ -0.98
NUP50-216ENST00000486184 COA4Q9NYJ1 87 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 COL6A5A8TX70 2615 aa8.95□□□□□ -0.98
NUP50-216ENST00000486184 FBN1P35555 2871 aaKnown RBP8.94□□□□□ -0.98
NUP50-216ENST00000486184 TEX50A0A1B0GTY4 177 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 TCRBV4S1A1TA0A5B7 111 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 INMT-MINDY4F8WBC2 141 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 PRAF2O60831 178 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 IFNA21P01568 189 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 IFNA17P01571 189 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 ELANEP08246 267 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 TRAPPC2P0DI81 140 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 TRAPPC2BP0DI82 140 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 SULT1A3P0DMM9 295 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 SULT1A4P0DMN0 295 aa8.94□□□□□ -0.98
NUP50-216ENST00000486184 EGR2P11161 476 aaPredicted RBP8.94□□□□□ -0.98
NUP50-216ENST00000486184 MYOD1P15172 320 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms