RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 F2RP25116 425 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 HRH1P35367 487 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 OR2B8PP59922 312 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 SBSPONQ8IVN8 264 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 CMTM1Q8IZ96 169 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 Q8N1Y9 231 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 DMBX1Q8NFW5 382 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 NAA50Q9GZZ1 169 aaKnown RBP14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 COMMD9Q9P000 198 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 PEMTQ9UBM1 199 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 DMRT1Q9Y5R6 373 aa14.02□□□□□ -0.17
PRPF40A-209ENST00000486100 HPGDSO60760 199 aa14.01□□□□□ -0.17
PRPF40A-209ENST00000486100 NDUFB8O95169 186 aa14.01□□□□□ -0.17
PRPF40A-209ENST00000486100 FRMD6-AS1P0C7T7 363 aa14.01□□□□□ -0.17
PRPF40A-209ENST00000486100 HIST1H1BP16401 226 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-209ENST00000486100 CTF1Q16619 201 aa14.01□□□□□ -0.17
PRPF40A-209ENST00000486100 MZT2AQ6P582 158 aa14.01□□□□□ -0.17
PRPF40A-209ENST00000486100 SNX29P2Q8IUI4 249 aa14.01□□□□□ -0.17
PRPF40A-209ENST00000486100 COMMD5Q9GZQ3 224 aa14.01□□□□□ -0.17
PRPF40A-209ENST00000486100 TMEM140Q9NV12 185 aa14.01□□□□□ -0.17
PRPF40A-209ENST00000486100 GPR31O00270 319 aa14□□□□□ -0.17
PRPF40A-209ENST00000486100 GABARAPO95166 117 aa14□□□□□ -0.17
PRPF40A-209ENST00000486100 RLN1P04808 185 aa14□□□□□ -0.17
PRPF40A-209ENST00000486100 DEFA4P12838 97 aa14□□□□□ -0.17
PRPF40A-209ENST00000486100 MECP2P51608 486 aaKnown RBP14□□□□□ -0.17
PRPF40A-209ENST00000486100 TSPAN5P62079 268 aa14□□□□□ -0.17
PRPF40A-209ENST00000486100 LPCAT3Q6P1A2 487 aa14□□□□□ -0.17
PRPF40A-209ENST00000486100 DGCR14Q96DF8 476 aaKnown RBP14□□□□□ -0.17
PRPF40A-209ENST00000486100 SRSF8Q9BRL6 282 aaKnown RBP14□□□□□ -0.17
PRPF40A-209ENST00000486100 FXYD6Q9H0Q3 95 aa14□□□□□ -0.17
PRPF40A-209ENST00000486100 PPP5D1E7EU14 171 aa13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 GGCTO75223 188 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 REG1AP05451 166 aa13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 ZNF182P17025 639 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 RCVRNP35243 200 aa13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 LPAR6P43657 344 aa13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 ERVK-16P61578 105 aa13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 CADM3Q8N126 398 aa13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 Q8N402 240 aa13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 FCAMRQ8WWV6 532 aa13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 AP3S1Q92572 193 aa13.99□□□□□ -0.17
PRPF40A-209ENST00000486100 IGLV11-55A0A075B6I3 123 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 IGLC7A0M8Q6 106 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 MARCH11A6NNE9 402 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 A8MZ25 164 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 FAM25AB3EWG3 89 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 FAM25CB3EWG5 89 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 FAM25GB3EWG6 89 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 OR2C1O95371 312 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 IGHV4-30-4P0DP06 118 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 RPA2P15927 270 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 ZNF585BQ52M93 769 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 GPR107Q5VW38 600 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 LCN12Q6JVE5 192 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 GPHB5Q86YW7 130 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 SGPP2Q8IWX5 399 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 OR2K2Q8NGT1 345 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 EEF1AKMT3Q96AZ1 226 aa13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 QTRT1Q9BXR0 403 aaKnown RBP13.98□□□□□ -0.17
PRPF40A-209ENST00000486100 TEX50A0A1B0GTY4 177 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 LGALS9O00182 355 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 KRASP01116 189 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 IGHV3-23P01764 117 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 HLA-AP01891 365 aaKnown RBP13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 S100GP29377 79 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 UCP3P55916 312 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 THOC7Q6I9Y2 204 aaKnown RBP13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 CLEC19AQ6UXS0 136 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 ADAMTSL5Q6ZMM2 481 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 CXorf58Q96LI9 332 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 CCDC140Q96MF4 163 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 MRPS26Q9BYN8 205 aaKnown RBP13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 C19orf73Q9NVV2 129 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 S4R3C0 116 aa13.97□□□□□ -0.17
PRPF40A-209ENST00000486100 TRBV7-1A0A0A6YYK4 115 aa13.96□□□□□ -0.17
PRPF40A-209ENST00000486100 TRAPPC2P0DI81 140 aa13.96□□□□□ -0.17
PRPF40A-209ENST00000486100 TRAPPC2BP0DI82 140 aa13.96□□□□□ -0.17
PRPF40A-209ENST00000486100 ARL3P36405 182 aa13.96□□□□□ -0.17
PRPF40A-209ENST00000486100 PHLDA2Q53GA4 152 aa13.96□□□□□ -0.17
PRPF40A-209ENST00000486100 HSD17B13Q7Z5P4 300 aaPredicted RBP13.96□□□□□ -0.17
PRPF40A-209ENST00000486100 OR1L8Q8NGR8 309 aa13.96□□□□□ -0.17
PRPF40A-209ENST00000486100 THAP7Q9BT49 309 aaPredicted RBP13.96□□□□□ -0.17
PRPF40A-209ENST00000486100 FAM212BQ9NTI7 297 aaPredicted RBP13.96□□□□□ -0.17
PRPF40A-209ENST00000486100 THYN1Q9P016 225 aa13.96□□□□□ -0.17
PRPF40A-209ENST00000486100 IZUMO1RA6ND01 250 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 TPPPO94811 219 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 CLEC3BP05452 202 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 G6PCP35575 357 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 ALDH3B2P48448 385 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 FAM106AQ4KMX7 169 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 GPR141Q7Z602 305 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 SLC38A6Q8IZM9 456 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 OR10W1Q8NGF6 305 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 RCHY1Q96PM5 261 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 ZMAT4Q9H898 229 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 NDUFA4L2Q9NRX3 87 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 KLK11Q9UBX7 282 aa13.95□□□□□ -0.18
PRPF40A-209ENST00000486100 HUWE1Q7Z6Z7 4374 aaKnown RBP13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 MFSD2BA6NFX1 497 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 C2orf70A6NJV1 201 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms