RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 ZNF645Q8N7E2 425 aa9.48□□□□□ -0.89
TMEM54-206ENST00000482771 KIR2DL5BQ8NHK3 375 aa9.48□□□□□ -0.89
TMEM54-206ENST00000482771 TMEM167AQ8TBQ9 72 aa9.48□□□□□ -0.89
TMEM54-206ENST00000482771 CENPOQ9BU64 300 aa9.48□□□□□ -0.89
TMEM54-206ENST00000482771 MRPS7Q9Y2R9 242 aaKnown RBP9.48□□□□□ -0.89
TMEM54-206ENST00000482771 RBMX2Q9Y388 322 aaKnown RBP9.48□□□□□ -0.89
TMEM54-206ENST00000482771 UFC1Q9Y3C8 167 aa9.48□□□□□ -0.89
TMEM54-206ENST00000482771 V9GY05 133 aa9.48□□□□□ -0.89
TMEM54-206ENST00000482771 NFYAP23511 347 aaPredicted RBP9.47□□□□□ -0.89
TMEM54-206ENST00000482771 GADD45AP24522 165 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 CALRP27797 417 aaKnown RBP9.47□□□□□ -0.89
TMEM54-206ENST00000482771 RANBP1P43487 201 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 ELLP55199 621 aaPredicted RBP9.47□□□□□ -0.89
TMEM54-206ENST00000482771 PRR20EP86478 221 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 PRR20CP86479 221 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 PRR20DP86480 221 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 PRR20BP86481 221 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 PRR20AP86496 221 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 KLK9Q2XQG4 91 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 PLET1Q6UQ28 207 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 SSX9Q7RTT3 188 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 PUSL1Q8N0Z8 303 aaKnown RBP9.47□□□□□ -0.89
TMEM54-206ENST00000482771 TSPAN14Q8NG11 270 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 VSTM2AQ8TAG5 236 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 CXorf58Q96LI9 332 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 SPAG8Q99932 426 aaPredicted RBP9.47□□□□□ -0.89
TMEM54-206ENST00000482771 MAP6D1Q9H9H5 199 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 KLK9Q9UKQ9 250 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 OR2W1Q9Y3N9 320 aa9.47□□□□□ -0.89
TMEM54-206ENST00000482771 IGLV11-55A0A075B6I3 123 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 TRAV1-2A0A0B4J238 106 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 MFNGO00587 321 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 TSPAN4O14817 238 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 IGLV2-14P01704 120 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 HLA-DQB1P01920 261 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 IFNA4P05014 189 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 RPA2P15927 270 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 HIST1H1DP16402 221 aaKnown RBP9.46□□□□□ -0.9
TMEM54-206ENST00000482771 FGF9P31371 208 aaPredicted RBP9.46□□□□□ -0.9
TMEM54-206ENST00000482771 GPR183P32249 361 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 BRWD1-AS2P59051 145 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 NANOS2P60321 138 aaKnown RBP9.46□□□□□ -0.9
TMEM54-206ENST00000482771 LAMTOR1Q6IAA8 161 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 Q6ZS49 121 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 MFSD4AQ8N468 514 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 OR5B3Q8NH48 314 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 TCTEX1D2Q8WW35 142 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 VCX3AQ9NNX9 186 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 FBXL17Q9UF56 701 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 ELF5Q9UKW6 265 aaPredicted RBP9.46□□□□□ -0.9
TMEM54-206ENST00000482771 SPATA2Q9UM82 520 aa9.46□□□□□ -0.9
TMEM54-206ENST00000482771 IGKV1D-13A0A0B4J2D9 117 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 CGB1A6NKQ9 187 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 SLC22A5O76082 557 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 S1PR2O95136 353 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 HRASP01112 189 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 IGKV1-13P0DP09 117 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 CD36P16671 472 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 FCGR2BP31994 310 aaPredicted RBP9.45□□□□□ -0.9
TMEM54-206ENST00000482771 RPL8P62917 257 aaKnown RBP9.45□□□□□ -0.9
TMEM54-206ENST00000482771 NEDD8Q15843 81 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 OR4S2Q8NH73 311 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 C11orf45Q8TAV5 145 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 ZNF502Q8TBZ5 544 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 GALNT14Q96FL9 552 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 HSD17B10Q99714 261 aaKnown RBP9.45□□□□□ -0.9
TMEM54-206ENST00000482771 ZNF436Q9C0F3 470 aaPredicted RBP9.45□□□□□ -0.9
TMEM54-206ENST00000482771 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
TMEM54-206ENST00000482771 METTL21EPA6NDL7 271 aa9.44□□□□□ -0.9
TMEM54-206ENST00000482771 CTXN2P0C2S0 81 aa9.44□□□□□ -0.9
TMEM54-206ENST00000482771 HLA-GP17693 338 aa9.44□□□□□ -0.9
TMEM54-206ENST00000482771 PTBP1P26599 531 aaKnown RBP eCLIP9.44□□□□□ -0.9
TMEM54-206ENST00000482771 RBMS2Q15434 407 aaKnown RBP9.44□□□□□ -0.9
TMEM54-206ENST00000482771 CDNFQ49AH0 187 aa9.44□□□□□ -0.9
TMEM54-206ENST00000482771 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
TMEM54-206ENST00000482771 GPHA2Q96T91 129 aa9.44□□□□□ -0.9
TMEM54-206ENST00000482771 RARRES2Q99969 163 aa9.44□□□□□ -0.9
TMEM54-206ENST00000482771 CSTL1Q9H114 145 aa9.44□□□□□ -0.9
TMEM54-206ENST00000482771 TAS2R8Q9NYW2 309 aa9.44□□□□□ -0.9
TMEM54-206ENST00000482771 OR4C46A6NHA9 309 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 PDCD5O14737 125 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 TGOLN2O43493 480 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 MYL9P24844 172 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 OR10A3P58181 314 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 OR2B8PP59922 312 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 EIF4EBP1Q13541 118 aaPredicted RBP9.43□□□□□ -0.9
TMEM54-206ENST00000482771 C2CD4CQ8TF44 421 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 C20orf24Q9BUV8 137 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 C6orf62Q9GZU0 229 aaPredicted RBP9.43□□□□□ -0.9
TMEM54-206ENST00000482771 ATG5Q9H1Y0 275 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 HRASLSQ9HDD0 168 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 TXNL4BQ9NX01 149 aaKnown RBP9.43□□□□□ -0.9
TMEM54-206ENST00000482771 THYN1Q9P016 225 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 SSR3Q9UNL2 185 aa9.43□□□□□ -0.9
TMEM54-206ENST00000482771 IGHV3OR16-8A0A075B7F1 116 aa9.42□□□□□ -0.9
TMEM54-206ENST00000482771 TRAV3A0A0B4J244 114 aa9.42□□□□□ -0.9
TMEM54-206ENST00000482771 OR2T8A6NH00 312 aa9.42□□□□□ -0.9
TMEM54-206ENST00000482771 MPTX1A8MV57 137 aa9.42□□□□□ -0.9
TMEM54-206ENST00000482771 ZNF207O43670 478 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms