RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 UPK2O00526 184 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 HRASP01112 189 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 PRH1P02810 166 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 CTSDP07339 412 aaPredicted RBP8.21□□□□□ -1.1
SSBP1-210ENST00000481508 NQO2P16083 231 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 RAB9AP51151 201 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 IZUMO4Q1ZYL8 232 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 SP6Q3SY56 376 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 AKIRIN2Q53H80 203 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 MMD2Q8IY49 270 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 TOMM5Q8N4H5 51 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 ZNF486Q96H40 463 aaPredicted RBP8.21□□□□□ -1.1
SSBP1-210ENST00000481508 GON7Q9BXV9 100 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 AKIP1Q9NQ31 210 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 MCUBQ9NWR8 336 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 PRR13Q9NZ81 148 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 GPR132Q9UNW8 380 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 NSG2Q9Y328 171 aa8.21□□□□□ -1.1
SSBP1-210ENST00000481508 H0Y980 276 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 KRASP01116 189 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 IGKV1-5P01602 117 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 IGHV3-11P01762 117 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 AREGP15514 252 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 HLA-GP17693 338 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 RPL27AP46776 148 aaKnown RBP8.2□□□□□ -1.1
SSBP1-210ENST00000481508 OR2B8PP59922 312 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 RPL8P62917 257 aaKnown RBP8.2□□□□□ -1.1
SSBP1-210ENST00000481508 ZNF45Q02386 682 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 ZNF695Q8IW36 515 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 TCTEX1D1Q8N7M0 179 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 POC5Q8NA72 575 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 DMBX1Q8NFW5 382 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 OR4F17Q8NGA8 305 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 OR4A5Q8NH83 315 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 LHFPL5Q8TAF8 219 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 CD300LFQ8TDQ1 290 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 SEC22AQ96IW7 307 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 FYTTD1Q96QD9 318 aaKnown RBP8.2□□□□□ -1.1
SSBP1-210ENST00000481508 OR4F4Q96R69 305 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 PHB2Q99623 299 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 PRRT1Q99946 306 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 ZFP57Q9NU63 452 aa8.2□□□□□ -1.1
SSBP1-210ENST00000481508 A0A0G2JRQ6 117 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 C3orf85A0A1B0GTC6 90 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 LINC00854A0A1B0GVQ3 168 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 I3L521 148 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 REG1AP05451 166 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 OR5AC1P0C628 307 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 P0C879 139 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 IL7P13232 177 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 BTCP35070 178 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 CDX1P47902 265 aaPredicted RBP8.19□□□□□ -1.1
SSBP1-210ENST00000481508 TPPP2P59282 170 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 TMEM267Q0VDI3 215 aaPredicted RBP8.19□□□□□ -1.1
SSBP1-210ENST00000481508 SURF2Q15527 256 aaPredicted RBP8.19□□□□□ -1.1
SSBP1-210ENST00000481508 ZNF57Q68EA5 555 aaPredicted RBP8.19□□□□□ -1.1
SSBP1-210ENST00000481508 TMEM65Q6PI78 240 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 MRPL41Q8IXM3 137 aaKnown RBP8.19□□□□□ -1.1
SSBP1-210ENST00000481508 LINC00482Q8N8I6 264 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 GDPD1Q8N9F7 314 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 OR5M8Q8NGP6 311 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 VSTM2AQ8TAG5 236 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 ZFAND1Q8TCF1 268 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 C4orf3Q8WVX3 66 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 P2RX4Q99571 388 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 FAM212BQ9NTI7 297 aaPredicted RBP8.19□□□□□ -1.1
SSBP1-210ENST00000481508 COPZ2Q9P299 210 aa8.19□□□□□ -1.1
SSBP1-210ENST00000481508 TEX50A0A1B0GTY4 177 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 IGLC7A0M8Q6 106 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 CRYM-AS1A6NIL9 109 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 G3V4G9 280 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 ACTL6BO94805 426 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 TRGV3P03979 118 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 UCP1P25874 307 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 S100GP29377 79 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 MAS1LP35410 378 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 CCR6P51684 374 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 ERVK-16P61578 105 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 TTC9CQ8N5M4 171 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 CCDC71LQ8N9Z2 235 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 OR10W1Q8NGF6 305 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 UBE2E2Q96LR5 201 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 NAA60Q9H7X0 242 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 ZNF355PQ9NSJ1 428 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 COA4Q9NYJ1 87 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 SCP2D1Q9UJQ7 156 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 C14orf166Q9Y224 244 aaKnown RBP8.18□□□□□ -1.1
SSBP1-210ENST00000481508 DNAH3Q8TD57 4116 aa8.18□□□□□ -1.1
SSBP1-210ENST00000481508 NOTCH3Q9UM47 2321 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 CCL24O00175 119 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 PLA2G10O15496 165 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 CREBL2O60519 120 aaPredicted RBP8.17□□□□□ -1.1
SSBP1-210ENST00000481508 TRBV12-3P01733 135 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 PF4P02776 101 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 LGALS1P09382 135 aaKnown RBP8.17□□□□□ -1.1
SSBP1-210ENST00000481508 ECI1P42126 302 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 AP3S2P59780 193 aa8.17□□□□□ -1.1
SSBP1-210ENST00000481508 SUPT4H1P63272 117 aaKnown RBP8.17□□□□□ -1.1
SSBP1-210ENST00000481508 FHL3Q13643 280 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms