RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 C1orf100Q5SVJ3 147 aa8.2□□□□□ -1.1
VEGFA-212ENST00000480614 TMEM252Q8N6L7 170 aa8.2□□□□□ -1.1
VEGFA-212ENST00000480614 SOX21Q9Y651 276 aaPredicted RBP8.2□□□□□ -1.1
VEGFA-212ENST00000480614 PLA2G10O15496 165 aa8.2□□□□□ -1.1
VEGFA-212ENST00000480614 MEF2CQ06413 473 aaPredicted RBP8.2□□□□□ -1.1
VEGFA-212ENST00000480614 GCSAMLQ5JQS6 135 aa8.2□□□□□ -1.1
VEGFA-212ENST00000480614 PEF1Q9UBV8 284 aaKnown RBP8.2□□□□□ -1.1
VEGFA-212ENST00000480614 MRPS18BQ9Y676 258 aaKnown RBP8.2□□□□□ -1.1
VEGFA-212ENST00000480614 STPG1Q5TH74 334 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 MIXL1Q9H2W2 232 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 SMOC1Q9H4F8 434 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 PLXNA2O75051 1894 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 HIST1H2BAQ96A08 127 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 LRRC37AA6NMS7 1700 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 C11orf68Q9H3H3 251 aaKnown RBP8.19□□□□□ -1.1
VEGFA-212ENST00000480614 IGHV3-21A0A0B4J1V1 117 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 SMIM13P0DJ93 91 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 FBLIM1Q8WUP2 373 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 SIPA1L1O43166 1804 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 LOC390937A0A1W2PQ73 354 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 SLC25A47Q6Q0C1 308 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 RGP1Q92546 391 aaPredicted RBP8.19□□□□□ -1.1
VEGFA-212ENST00000480614 PGPA6NDG6 321 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 MIC13Q5XKP0 118 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 ZNF385CQ66K41 422 aaPredicted RBP8.19□□□□□ -1.1
VEGFA-212ENST00000480614 FAM159AQ6UWV7 190 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 TNFRSF18Q9Y5U5 241 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 PLXNA3P51805 1871 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 C1QTNF9BB2RNN3 333 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 C8orf82Q6P1X6 216 aaPredicted RBP8.19□□□□□ -1.1
VEGFA-212ENST00000480614 SPAARA0A1B0GVQ0 90 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 LTBP4Q8N2S1 1624 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 GATAD1Q8WUU5 269 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 PGLYRP1O75594 196 aaPredicted RBP8.19□□□□□ -1.1
VEGFA-212ENST00000480614 HLA-DQB1P01920 261 aa8.19□□□□□ -1.1
VEGFA-212ENST00000480614 SRIP30626 198 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 A0A1W2PPV9 198 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 SSTR5P35346 364 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 AICDAQ9GZX7 198 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 A0A1W2PPE3 182 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 SLC25A20O43772 301 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 TSPAN2O60636 221 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 GLIPR1P48060 266 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 HIST1H1AQ02539 215 aaPredicted RBP8.18□□□□□ -1.1
VEGFA-212ENST00000480614 FXYD3Q14802 87 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 ZNF79Q15937 498 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 RARRES2Q99969 163 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 HDHD3Q9BSH5 251 aaPredicted RBP8.18□□□□□ -1.1
VEGFA-212ENST00000480614 TRAV9-1A0A075B6T8 112 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 FOXS1O43638 330 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 FTH1P19P0C7X4 201 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 SRSF12Q8WXF0 261 aaKnown RBP8.18□□□□□ -1.1
VEGFA-212ENST00000480614 SETD2Q9BYW2 2564 aaPredicted RBP8.18□□□□□ -1.1
VEGFA-212ENST00000480614 FGFRL1Q8N441 504 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 PF4P02776 101 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 IL9P15248 144 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 CACNG7P62955 275 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 RTN4RL2Q86UN3 420 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 TRAV39A0A0B4J263 110 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 PARLQ9H300 379 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 KIF26AQ9ULI4 1882 aaPredicted RBP8.18□□□□□ -1.1
VEGFA-212ENST00000480614 TYMSP04818 313 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 UCP3P55916 312 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 FAM74A4Q5TZK3 123 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 Q96M66 194 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 ZNF385AQ96PM9 386 aaKnown RBP8.18□□□□□ -1.1
VEGFA-212ENST00000480614 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 ZNF488Q96MN9 340 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 OPN3Q9H1Y3 402 aaPredicted RBP8.18□□□□□ -1.1
VEGFA-212ENST00000480614 PLSCR2Q9NRY7 297 aa8.18□□□□□ -1.1
VEGFA-212ENST00000480614 ZFHX2Q9C0A1 2572 aaPredicted RBP8.18□□□□□ -1.1
VEGFA-212ENST00000480614 A0A0J9YW62 118 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 SCTP09683 121 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 LIMS1P48059 325 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 CHODLQ9H9P2 273 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 ARF6P62330 175 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 CENPWQ5EE01 88 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 DENND4CQ5VZ89 1909 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 DANCRP0C864 163 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 VSIG10L2P0DP72 767 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 CCL27Q9Y4X3 112 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 TRGC2P03986 189 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 THY1P04216 161 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 EFNB2P52799 333 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 ZNF501Q96CX3 271 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-212ENST00000480614 TRBV5-7A0A0A0MS05 114 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 EIF3GO75821 320 aaKnown RBP eCLIP8.17□□□□□ -1.1
VEGFA-212ENST00000480614 TCF19Q9Y242 345 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 C7orf71A4D174 169 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 GCHFRP30047 84 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 C1orf162Q8NEQ5 155 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-212ENST00000480614 CACNG8Q8WXS5 425 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 FMC1Q96HJ9 113 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 F11RQ9Y624 299 aaKnown RBP8.17□□□□□ -1.1
VEGFA-212ENST00000480614 CNTFRP26992 372 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 ZNF600Q6ZNG1 722 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 TRGV3P03979 118 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 IGHV4-34P06331 123 aa8.17□□□□□ -1.1
VEGFA-212ENST00000480614 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-212ENST00000480614 IGHV3OR16-12A0A075B7B8 117 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms