RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	NDUFA3	O95167	84 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	IGKV1-16	P04430	117 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	AKR1C4	P17516	323 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	CDX1	P47902	265 aa	Predicted RBP	12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	C5orf64	Q2M2E5	130 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	LIN54	Q6MZP7	749 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	TEX38	Q6PEX7	206 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	TMED4	Q7Z7H5	227 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	GON7	Q9BXV9	100 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	C5orf66	Q9H5L9	145 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	NAA60	Q9H7X0	242 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	CACFD1	Q9UGQ2	172 aa		12.09	□□□□□ -0.47
HDLBP-238	ENST00000479894	CRYM-AS1	A6NIL9	109 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	ACTL6B	O94805	426 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	TCRB	P04435	133 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	FGF2	P09038	288 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	PI3	P19957	117 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	CCR6	P51684	374 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	PSG5	Q15238	335 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	OR2B11	Q5JQS5	317 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	LCNL1	Q6ZST4	164 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	C5orf56	Q8N8D9	126 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	MRGPRF	Q96AM1	343 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	GALNT14	Q96FL9	552 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	RHOV	Q96L33	236 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	ALX4	Q9H161	411 aa	Predicted RBP	12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	PLSCR3	Q9NRY6	295 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	METTL1	Q9UBP6	276 aa	Known RBP	12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	NUBP2	Q9Y5Y2	271 aa		12.08	□□□□□ -0.48
HDLBP-238	ENST00000479894	ALMS1	Q8TCU4	4167 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	OR2A4	O95047	310 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	HLA-DRB1	P01911	266 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	LPAR6	P43657	344 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	FHL3	Q13643	280 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	POU2AF1	Q16633	256 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	TRIM16L	Q309B1	348 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	DEFB136	Q30KP8	78 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	SLC25A42	Q86VD7	318 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	PPP1R27	Q86WC6	154 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	FOXRED2	Q8IWF2	684 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	MMD2	Q8IY49	270 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	STPG2	Q8N412	459 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	FAM71E2	Q8N5Q1	922 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894		Q8N9W7	124 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	DMBX1	Q8NFW5	382 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	IL22RA2	Q969J5	263 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	OR2A7	Q96R45	310 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	TMEM222	Q9H0R3	208 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	TBC1D24	Q9ULP9	559 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	VSIG4	Q9Y279	399 aa		12.07	□□□□□ -0.48
HDLBP-238	ENST00000479894	SNAPC5	O75971	98 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	IGHG2	P01859	326 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	UCP1	P25874	307 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	MAS1L	P35410	378 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	F2RL1	P55085	397 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	LINC00205	P59089	165 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	PLET1	Q6UQ28	207 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	ZNF429	Q86V71	674 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	FAM219A	Q8IW50	185 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	DUSP18	Q8NEJ0	188 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	RRNAD1	Q96FB5	475 aa	Known RBP	12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	FKBP11	Q9NYL4	201 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	BET1L	Q9NYM9	111 aa		12.06	□□□□□ -0.48
HDLBP-238	ENST00000479894	TNC	P24821	2201 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	DUXB	A0A1W2PPF3	345 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	MARCH11	A6NNE9	402 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	SLC25A17	O43808	307 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	CDS2	O95674	445 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	PTTG1	O95997	202 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	RPLP1	P05386	114 aa	Known RBP	12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	H2AFB2	P0C5Z0	115 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	VAMP1	P23763	118 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	BTC	P35070	178 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	C4orf46	Q504U0	113 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	ZNF562	Q6V9R5	426 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	H2BFWT	Q7Z2G1	175 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	LGI3	Q8N145	548 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	RNF152	Q8N8N0	203 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	RNASE11	Q8TAA1	199 aa	Known RBP	12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	IL17D	Q8TAD2	202 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	GPHA2	Q96T91	129 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	C20orf85	Q9H1P6	137 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	ZNF580	Q9UK33	172 aa		12.05	□□□□□ -0.48
HDLBP-238	ENST00000479894	RYR1	P21817	5038 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	AP4M1	O00189	453 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	ARPC1B	O15143	372 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	CNIH1	O95406	144 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	IGLV2-23	P01705	113 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	BRWD1-AS2	P59051	145 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	SLC35E3	Q7Z769	313 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	COQ8A	Q8NI60	647 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	TMEM167A	Q8TBQ9	72 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	C4orf3	Q8WVX3	66 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	RBPMS	Q93062	196 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	TMEM68	Q96MH6	324 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	TMEM56	Q96MV1	263 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	FBXL15	Q9H469	300 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	GPN1	Q9HCN4	374 aa	Predicted RBP	12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms