RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 SERTAD4Q9NUC0 356 aa17.17■□□□□ 0.34
COL13A1-208ENST00000479733 HINT1P49773 126 aaPredicted RBP17.17■□□□□ 0.34
COL13A1-208ENST00000479733 STPG3Q8N7X2 389 aa17.17■□□□□ 0.34
COL13A1-208ENST00000479733 KMT2EQ8IZD2 1858 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 C20orf202A1L168 122 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 K7ESF4 209 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 MPDU1O75352 247 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 GNG4P50150 75 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 PTTG1IPP53801 180 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 LCN12Q6JVE5 192 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 TXNDC17Q9BRA2 123 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 LAMTOR2Q9Y2Q5 125 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 PROP1O75360 226 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 GPR12P47775 334 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 TBC1D28Q2M2D7 210 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 LINC00696Q6ZRV3 163 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 C1orf159Q96HA4 380 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 HSD17B10Q99714 261 aaKnown RBP17.16■□□□□ 0.34
COL13A1-208ENST00000479733 HINT2Q9BX68 163 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 GP6Q9HCN6 339 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 GCM1Q9NP62 436 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 FZR1Q9UM11 496 aa17.16■□□□□ 0.34
COL13A1-208ENST00000479733 TRIOBPQ9H2D6 2365 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 KNTC1P50748 2209 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 PATE3B3GLJ2 98 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 CTRLP40313 264 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 PLGLB1Q02325 96 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 Q8TCH9 128 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 FAM122AQ96E09 287 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 UQCR10Q9UDW1 63 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 SLC45A2Q9UMX9 530 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 HELTA6NFD8 242 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 AHRRA9YTQ3 701 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 M0R1X1 148 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 CA1P00915 261 aaPredicted RBP17.15■□□□□ 0.34
COL13A1-208ENST00000479733 C3orf79P0CE67 100 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 IGLC2P0DOY2 106 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 IGLC3P0DOY3 106 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 RPL39P5Q59GN2 51 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 MIR17HGQ75NE6 70 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 GMPPAQ96IJ6 420 aaPredicted RBP17.15■□□□□ 0.34
COL13A1-208ENST00000479733 SFXN3Q9BWM7 321 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 GNB1LQ9BYB4 327 aa17.15■□□□□ 0.34
COL13A1-208ENST00000479733 GFRA3O60609 400 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 MGST1P10620 155 aaKnown RBP17.14■□□□□ 0.33
COL13A1-208ENST00000479733 RPP30P78346 268 aaKnown RBP17.14■□□□□ 0.33
COL13A1-208ENST00000479733 PSG5Q15238 335 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 FBXW9Q5XUX1 488 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 TDHQ8IZJ6 230 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 FAM173AQ9BQD7 235 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 DPRXA6NFQ7 191 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 CCL25O15444 150 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 SMPD2O60906 423 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 SLC35E4Q6ICL7 350 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 RNASE8Q8TDE3 154 aaKnown RBP17.14■□□□□ 0.33
COL13A1-208ENST00000479733 ASCL3Q9NQ33 180 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 GNG12Q9UBI6 72 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 B4GALT7Q9UBV7 327 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 MPV17P39210 176 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 RHOBP62745 196 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 PRR31Q5SQ13 230 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 DCAF12Q5T6F0 453 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 UNQ5815/PRO19632Q6UWF5 114 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 NHLRC2Q8NBF2 726 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 KCNS1Q96KK3 526 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 TTTY12Q9BZ98 90 aa17.14■□□□□ 0.33
COL13A1-208ENST00000479733 TDGF1P13385 188 aa17.13■□□□□ 0.33
COL13A1-208ENST00000479733 DUTP33316 252 aaKnown RBP17.13■□□□□ 0.33
COL13A1-208ENST00000479733 ZNF766Q5HY98 468 aa17.13■□□□□ 0.33
COL13A1-208ENST00000479733 TMEM136Q6ZRR5 245 aa17.13■□□□□ 0.33
COL13A1-208ENST00000479733 BCL2L2Q92843 193 aaPredicted RBP17.13■□□□□ 0.33
COL13A1-208ENST00000479733 NPVFQ9HCQ7 196 aa17.13■□□□□ 0.33
COL13A1-208ENST00000479733 TRAV9-1A0A075B6T8 112 aa17.13■□□□□ 0.33
COL13A1-208ENST00000479733 TIPARPQ7Z3E1 657 aaKnown RBP17.13■□□□□ 0.33
COL13A1-208ENST00000479733 TMEM251Q8N6I4 163 aa17.13■□□□□ 0.33
COL13A1-208ENST00000479733 FAM216AQ8WUB2 273 aa17.13■□□□□ 0.33
COL13A1-208ENST00000479733 CT55Q8WUE5 264 aa17.13■□□□□ 0.33
COL13A1-208ENST00000479733 TRGV10A0A0A0MS01 117 aa17.12■□□□□ 0.33
COL13A1-208ENST00000479733 IGFBP2P18065 325 aa17.12■□□□□ 0.33
COL13A1-208ENST00000479733 VDAC2P45880 294 aaPredicted RBP17.12■□□□□ 0.33
COL13A1-208ENST00000479733 ZNF324O75467 553 aaPredicted RBP17.12■□□□□ 0.33
COL13A1-208ENST00000479733 OR10J4P0C629 311 aa17.12■□□□□ 0.33
COL13A1-208ENST00000479733 MYOD1P15172 320 aa17.12■□□□□ 0.33
COL13A1-208ENST00000479733 TEPPQ6URK8 271 aa17.12■□□□□ 0.33
COL13A1-208ENST00000479733 TET2Q6N021 2002 aaPredicted RBP17.11■□□□□ 0.33
COL13A1-208ENST00000479733 PRSS46E5RG02 174 aa17.11■□□□□ 0.33
COL13A1-208ENST00000479733 GATA2P23769 480 aaPredicted RBP17.11■□□□□ 0.33
COL13A1-208ENST00000479733 CX3CL1P78423 397 aa17.11■□□□□ 0.33
COL13A1-208ENST00000479733 BMPR1BO00238 502 aa17.11■□□□□ 0.33
COL13A1-208ENST00000479733 MT-CO2P00403 227 aa17.11■□□□□ 0.33
COL13A1-208ENST00000479733 ERVK-16P61578 105 aa17.11■□□□□ 0.33
COL13A1-208ENST00000479733 NANOS1Q8WY41 292 aaKnown RBP17.11■□□□□ 0.33
COL13A1-208ENST00000479733 CDX2Q99626 313 aaPredicted RBP17.11■□□□□ 0.33
COL13A1-208ENST00000479733 C9JCJ5 164 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 ABHD17BQ5VST6 288 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 NIT1Q86X76 327 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 LEAP2Q969E1 77 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 BORCS7Q96B45 105 aa17.1■□□□□ 0.33
COL13A1-208ENST00000479733 SSBP3Q9BWW4 388 aaPredicted RBP17.1■□□□□ 0.33
COL13A1-208ENST00000479733 TCF19Q9Y242 345 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms