RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 YPEL2Q96QA6 119 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 JPT1Q9UK76 154 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 PITPNC1Q9UKF7 332 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 WDR83OSQ9Y284 106 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 TRBV20OR9-2A0A075B6H5 130 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 TMEM250H0YL14 139 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 RBFOX2O43251 390 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS52-217ENST00000478934 HRASP01112 189 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 CCL8P80075 99 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 TMEM183AQ8IXX5 376 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 RBMXL3Q8N7X1 1067 aaKnown RBP8.89□□□□□ -0.99
VPS52-217ENST00000478934 TANC2Q9HCD6 1990 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 DCHS2Q6V1P9 2916 aa8.89□□□□□ -0.99
VPS52-217ENST00000478934 MUC6Q6W4X9 2439 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 SCO2A0A1W2PP80 73 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 F2RL2O00254 374 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 FOXH1O75593 365 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 IGHV1-46P01743 117 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 CGB3P0DN86 165 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 CGB7P0DN87 165 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 GLRXP35754 106 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 ACOT6Q3I5F7 207 aaPredicted RBP8.88□□□□□ -0.99
VPS52-217ENST00000478934 TIMM23BQ5SRD1 257 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 LINC01551Q86U37 167 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 OR2T10Q8NGZ9 312 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 MANBALQ9NQG1 85 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 TCF19Q9Y242 345 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 PRSS46E5RG02 174 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 C17orf112F2Z3M2 114 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 MBP02144 154 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 IGKV1-16P04430 117 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 GZMBP10144 247 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 CD33P20138 364 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 NUBP1P53384 320 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 SPCS3P61009 180 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 PMS2P11Q13670 270 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 OR4A47Q6IF82 309 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 DDB2Q92466 427 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 ZGRF1Q86YA3 2104 aa8.88□□□□□ -0.99
VPS52-217ENST00000478934 A0A1B0GV90 55 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 KLK10O43240 276 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 ACTL6BO94805 426 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 IL3RAP26951 378 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 TNFAIP6P98066 277 aaPredicted RBP8.87□□□□□ -0.99
VPS52-217ENST00000478934 MLANAQ16655 118 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 PDLIM3Q53GG5 364 aaPredicted RBP8.87□□□□□ -0.99
VPS52-217ENST00000478934 ARSJQ5FYB0 599 aaPredicted RBP8.87□□□□□ -0.99
VPS52-217ENST00000478934 ASPHD1Q5U4P2 390 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 RND1Q92730 232 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 SEPSECSQ9HD40 501 aaKnown RBP8.87□□□□□ -0.99
VPS52-217ENST00000478934 PXMP4Q9Y6I8 212 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 A0A087X0M5 115 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 A0A1B0GX30 115 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 ZNF320A2RRD8 509 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 SRRM4A7MD48 611 aaKnown RBP8.87□□□□□ -0.99
VPS52-217ENST00000478934 CCKARP32238 428 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 ERVK-16P61578 105 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 CR1LQ2VPA4 569 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 C1orf185Q5T7R7 199 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 TCTEX1D1Q8N7M0 179 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 GAFA1Q96PS6 74 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 PYGO2Q9BRQ0 406 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 TUBG2Q9NRH3 451 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 NAV3Q8IVL0 2385 aa8.87□□□□□ -0.99
VPS52-217ENST00000478934 IGLV3-9A0A075B6K5 115 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 KBTBD11-OT1A0A1B0GTJ5 212 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 NUPR1O60356 82 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 SNRPCP09234 159 aaKnown RBP8.86□□□□□ -0.99
VPS52-217ENST00000478934 FRMD6-AS1P0C7T7 363 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 RNF224P0DH78 156 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 GATA2P23769 480 aaPredicted RBP8.86□□□□□ -0.99
VPS52-217ENST00000478934 DDTP30046 118 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 MRPS11P82912 194 aaKnown RBP8.86□□□□□ -0.99
VPS52-217ENST00000478934 PAX5Q02548 391 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 TRAT1Q6PIZ9 186 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 Q6ZS92 163 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 LURAP1LQ8IV03 231 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 TMEM256Q8N2U0 113 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 ZCCHC14Q8WYQ9 949 aaKnown RBP8.86□□□□□ -0.99
VPS52-217ENST00000478934 GGTLC1Q9BX51 225 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 RNF7Q9UBF6 113 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 YTHDF2Q9Y5A9 579 aaKnown RBP8.86□□□□□ -0.99
VPS52-217ENST00000478934 GRIFINA4D1Z8 144 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 SLC17A3O00476 420 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 FCN3O75636 299 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 CA2P00918 260 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 CFHR2P36980 270 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 PPP1R35Q8TAP8 253 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 IMMP2LQ96T52 175 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 DYSFO75923 2080 aa8.86□□□□□ -0.99
VPS52-217ENST00000478934 TMPRSS2O15393 492 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 CD40P25942 277 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 REG1BP48304 166 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 MZT1Q08AG7 82 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 ACTL10Q5JWF8 245 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 STUMQ69YW2 141 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 WFDC8Q8IUA0 241 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 ZNF664Q8N3J9 261 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 FAM169BQ8N8A8 192 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 SGMS2Q8NHU3 365 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms