RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 NOTCH1P46531 2555 aa6.33□□□□□ -1.4
DDX39B-218ENST00000478365 VWFP04275 2813 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 SAA2-SAA4A0A096LPE2 208 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 TRBV6-7A0A0A0MS04 114 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 NCBP2LA6PVI3 153 aaKnown RBP6.32□□□□□ -1.4
DDX39B-218ENST00000478365 COLCA2A8K830 154 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 SPDEFO95238 335 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 IGHG2P01859 326 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 HOXB5P09067 269 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 CSF1P09603 554 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 SCTP09683 121 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 SAA2P0DJI9 122 aaPredicted RBP6.32□□□□□ -1.4
DDX39B-218ENST00000478365 OR5H8P0DN80 308 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 VSIG10L2P0DP72 767 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 HOXA5P20719 270 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 GPR12P47775 334 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 REG1BP48304 166 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 ZNF134P52741 427 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 MOGAT2Q3SYC2 334 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 TMEM88Q6PEY1 159 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 CNIH2Q6PI25 160 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 TMUB2Q71RG4 321 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 ZFP82Q8N141 532 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 NUDT10Q8NFP7 164 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 OR4F17Q8NGA8 305 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 C15orf40Q8WUR7 153 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 OR4F4Q96R69 305 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 NABP2Q9BQ15 211 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 AGMATQ9BSE5 352 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 GPN1Q9HCN4 374 aaPredicted RBP6.32□□□□□ -1.4
DDX39B-218ENST00000478365 FBXO7Q9Y3I1 522 aa6.32□□□□□ -1.4
DDX39B-218ENST00000478365 RBM7Q9Y580 266 aaKnown RBP6.32□□□□□ -1.4
DDX39B-218ENST00000478365 A0A0D9SG52 128 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 SMIM30A4D0T7 59 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 XRCC3O43542 346 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 FGF7P21781 194 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 CD24P25063 80 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 FHITP49789 147 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 AP3S2P59780 193 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 BLCAPP62952 87 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 DLK1P80370 383 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 IL18Q14116 193 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 DIAPH2-AS1Q14236 149 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 MMDQ15546 238 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 MSMO1Q15800 293 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 RTL8BQ17RB0 113 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 ZNF260Q3ZCT1 412 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 UTF1Q5T230 341 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 TREML4Q6UXN2 200 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 SLC35E3Q7Z769 313 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 CENPVQ7Z7K6 275 aaPredicted RBP6.31□□□□□ -1.4
DDX39B-218ENST00000478365 PDPNQ86YL7 162 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 ODF3L1Q8IXM7 274 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 OR2D3Q8NGH3 330 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 OR5AN1Q8NGI8 311 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 WIPF2Q8TF74 440 aaPredicted RBP6.31□□□□□ -1.4
DDX39B-218ENST00000478365 RHOVQ96L33 236 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 MRPL20Q9BYC9 149 aaKnown RBP6.31□□□□□ -1.4
DDX39B-218ENST00000478365 OR1A1Q9P1Q5 309 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 SIGLEC9Q9Y336 463 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 WASHC3Q9Y3C0 194 aa6.31□□□□□ -1.4
DDX39B-218ENST00000478365 TRAV18A0A075B6X5 111 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 IGHV3-72A0A0B4J1Y9 119 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 PSMB11A5LHX3 300 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 TMEM235A6NFC5 223 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 NAP1L6A6NFF2 107 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 H0YJW9 148 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 NBR2O15453 112 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 NDUFA3O95167 84 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 HLA-DRB1P01911 266 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 TCRBP04435 133 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 AMY1AP04745 511 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 AMY2AP04746 511 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 RPLP1P05386 114 aaKnown RBP6.3□□□□□ -1.4
DDX39B-218ENST00000478365 OR8U8P0C7N1 319 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 LGALS7P47929 136 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 THBS3P49746 956 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 LUMP51884 338 aaPredicted RBP6.3□□□□□ -1.4
DDX39B-218ENST00000478365 ACTBP60709 375 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 MRPS10P82664 201 aaKnown RBP6.3□□□□□ -1.4
DDX39B-218ENST00000478365 PLA2G7Q13093 441 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 TMEM69Q5SWH9 247 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 ALKAL2Q6UX46 152 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 IL34Q6ZMJ4 242 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 Q6ZPA2 131 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 CBLN2Q8IUK8 224 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 H1FOOQ8IZA3 346 aaPredicted RBP6.3□□□□□ -1.4
DDX39B-218ENST00000478365 FAM71E2Q8N5Q1 922 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 TCTEX1D1Q8N7M0 179 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 SAMD12Q8N8I0 201 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 Q8N9W7 124 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 UBAC2Q8NBM4 344 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 NPBQ8NG41 125 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 OR5AU1Q8NGC0 362 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 TAF15Q92804 592 aaKnown RBP eCLIP6.3□□□□□ -1.4
DDX39B-218ENST00000478365 SLC25A38Q96DW6 304 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 TXN2Q99757 166 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 ST6GALNAC5Q9BVH7 336 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 OR2D2Q9H210 308 aa6.3□□□□□ -1.4
DDX39B-218ENST00000478365 RNF167Q9H6Y7 350 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms