RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 OR2B11Q5JQS5 317 aa7.16□□□□□ -1.26
CCM2-210ENST00000478169 UNQ9165/PRO28630Q6UXU0 137 aa7.16□□□□□ -1.26
CCM2-210ENST00000478169 PHLDA1Q8WV24 401 aaPredicted RBP7.16□□□□□ -1.26
CCM2-210ENST00000478169 ACOT13Q9NPJ3 140 aa7.16□□□□□ -1.26
CCM2-210ENST00000478169 MFSD2BA6NFX1 497 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 IFITM5A6NNB3 132 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 DEDDO75618 318 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 NFYAP23511 347 aaPredicted RBP7.15□□□□□ -1.26
CCM2-210ENST00000478169 HSPA13P48723 471 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 RPL8P62917 257 aaKnown RBP7.15□□□□□ -1.26
CCM2-210ENST00000478169 FABP5Q01469 135 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 MLLT11Q13015 90 aaPredicted RBP7.15□□□□□ -1.26
CCM2-210ENST00000478169 EIF4EBP1Q13541 118 aaPredicted RBP7.15□□□□□ -1.26
CCM2-210ENST00000478169 OGFRL1Q5TC84 451 aaPredicted RBP7.15□□□□□ -1.26
CCM2-210ENST00000478169 LAMTOR1Q6IAA8 161 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 PLET1Q6UQ28 207 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 ZNF66Q6ZN08 573 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 MFSD4AQ8N468 514 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 OR4A5Q8NH83 315 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 ZNF502Q8TBZ5 544 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 TCTEX1D2Q8WW35 142 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 AIFM2Q9BRQ8 373 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 ZNF436Q9C0F3 470 aaPredicted RBP7.15□□□□□ -1.26
CCM2-210ENST00000478169 DCSTAMPQ9H295 470 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 BET1LQ9NYM9 111 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 THYN1Q9P016 225 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 NDUFA13Q9P0J0 144 aa7.15□□□□□ -1.26
CCM2-210ENST00000478169 TRAV1-2A0A0B4J238 106 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 IGKV1D-13A0A0B4J2D9 117 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 CASQ2O14958 399 aaPredicted RBP7.14□□□□□ -1.27
CCM2-210ENST00000478169 REG1AP05451 166 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 IGKV1-13P0DP09 117 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 HLA-GP17693 338 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 CRHBPP24387 322 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 PTBP1P26599 531 aaKnown RBP eCLIP7.14□□□□□ -1.279e-9■■■■■ 35.7
CCM2-210ENST00000478169 GPR183P32249 361 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 BRWD1-AS2P59051 145 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 RCN1Q15293 331 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 CNIH2Q6PI25 160 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 GALNT14Q96FL9 552 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 SRSF8Q9BRL6 282 aaKnown RBP7.14□□□□□ -1.27
CCM2-210ENST00000478169 DUSP21Q9H596 190 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 UBQLN2Q9UHD9 624 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 SPATA2Q9UM82 520 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 TPRKBQ9Y3C4 175 aa7.14□□□□□ -1.27
CCM2-210ENST00000478169 OR4C46A6NHA9 309 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 CGB1A6NKQ9 187 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 CYB5BO43169 146 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 RGS10O43665 173 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 OR10A3P58181 314 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 OR2B8PP59922 312 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 ODF3L2Q3SX64 289 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 CDNFQ49AH0 187 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 HACD4Q5VWC8 232 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 SSX9Q7RTT3 188 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 VN1R17PQ8TDU5 208 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 TMEM190Q8WZ59 177 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 MGLLQ99685 303 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 C6orf62Q9GZU0 229 aaPredicted RBP7.13□□□□□ -1.27
CCM2-210ENST00000478169 ATG5Q9H1Y0 275 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 MAP6D1Q9H9H5 199 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 DAZ1Q9NQZ3 744 aaKnown RBP7.13□□□□□ -1.27
CCM2-210ENST00000478169 TAS2R8Q9NYW2 309 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 ELF5Q9UKW6 265 aaPredicted RBP7.13□□□□□ -1.27
CCM2-210ENST00000478169 VPS13DQ5THJ4 4388 aa7.13□□□□□ -1.27
CCM2-210ENST00000478169 MUC4Q99102 2169 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 IGHV3-35A0A0C4DH35 117 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 IGLC7A0M8Q6 106 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 K7EMT4 169 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 RBFOX2O43251 390 aaKnown RBP eCLIP7.12□□□□□ -1.276e-11■■■■■ 38.6
CCM2-210ENST00000478169 TGOLN2O43493 480 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 IFNA4P05014 189 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 FGF2P09038 288 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 RPL35AP18077 110 aaKnown RBP7.12□□□□□ -1.27
CCM2-210ENST00000478169 RAB3BP20337 219 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 CMC4P56277 68 aaPredicted RBP7.12□□□□□ -1.27
CCM2-210ENST00000478169 TCTAP57738 103 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 MSMO1Q15800 293 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 TIMM50Q3ZCQ8 353 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 SPSB3Q6PJ21 355 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 GATAD1Q8WUU5 269 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 BSCL2Q96G97 398 aaPredicted RBP7.12□□□□□ -1.27
CCM2-210ENST00000478169 ATP6V0BQ99437 205 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 COMMD5Q9GZQ3 224 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 MFFQ9GZY8 342 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 HRASLSQ9HDD0 168 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 ANXA10Q9UJ72 324 aa7.12□□□□□ -1.27
CCM2-210ENST00000478169 NDUFA4O00483 81 aa7.11□□□□□ -1.27
CCM2-210ENST00000478169 UPK2O00526 184 aa7.11□□□□□ -1.27
CCM2-210ENST00000478169 HPRT1P00492 218 aa7.11□□□□□ -1.27
CCM2-210ENST00000478169 RPA2P15927 270 aa7.11□□□□□ -1.27
CCM2-210ENST00000478169 MYL9P24844 172 aa7.11□□□□□ -1.27
CCM2-210ENST00000478169 FCGR2BP31994 310 aaPredicted RBP7.11□□□□□ -1.27
CCM2-210ENST00000478169 TAS2R31P59538 309 aa7.11□□□□□ -1.27
CCM2-210ENST00000478169 RBMS2Q15434 407 aaKnown RBP7.11□□□□□ -1.27
CCM2-210ENST00000478169 POU2AF1Q16633 256 aa7.11□□□□□ -1.27
CCM2-210ENST00000478169 THOC7Q6I9Y2 204 aaKnown RBP7.11□□□□□ -1.27
CCM2-210ENST00000478169 PRSS48Q7RTY5 328 aa7.11□□□□□ -1.27
CCM2-210ENST00000478169 HSD17B13Q7Z5P4 300 aaPredicted RBP7.11□□□□□ -1.27
CCM2-210ENST00000478169 SPAG16Q8N0X2 631 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms