RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 DPY30Q9C005 99 aa2.78□□□□□ -1.96
FNDC3B-209ENST00000478016 SELENOIQ9C0D9 397 aa2.78□□□□□ -1.96
FNDC3B-209ENST00000478016 UBE2TQ9NPD8 197 aaPredicted RBP2.78□□□□□ -1.96
FNDC3B-209ENST00000478016 HEBP1Q9NRV9 189 aa2.78□□□□□ -1.96
FNDC3B-209ENST00000478016 NUFIP1Q9UHK0 495 aaKnown RBP2.78□□□□□ -1.96
FNDC3B-209ENST00000478016 ZNF443Q9Y2A4 671 aaPredicted RBP2.78□□□□□ -1.96
FNDC3B-209ENST00000478016 RNF11Q9Y3C5 154 aa2.78□□□□□ -1.96
FNDC3B-209ENST00000478016 PAM16Q9Y3D7 125 aa2.78□□□□□ -1.96
FNDC3B-209ENST00000478016 SOX21Q9Y651 276 aaPredicted RBP2.78□□□□□ -1.96
FNDC3B-209ENST00000478016 RBBP6Q7Z6E9 1792 aaKnown RBP2.78□□□□□ -1.96
FNDC3B-209ENST00000478016 DOCK2Q92608 1830 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 COL1A2P08123 1366 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 TRBV19A0A075B6N1 114 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 TRAV4A0A0B4J268 109 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 LOC107984640A0A0U1RRK4 108 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 RIIAD1A6NNX1 92 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ZNF705EA8MWA4 302 aaPredicted RBP2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ZNF670-ZNF695F2Z2N8 137 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 FNDC10F2Z333 226 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 CCDC179H3BU77 68 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 K7EQS6 105 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 TIMM23O14925 209 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 BCL2L11O43521 198 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 DPM2O94777 84 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 GABARAPO95166 117 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 CXorf1O96002 111 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 CFDP00746 253 aaPredicted RBP2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 KRASP01116 189 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ATP1B1P05026 303 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 SLC35G6P0C7Q6 338 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 CPMP14384 443 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 CTLA4P16410 223 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 NTF3P20783 257 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ZNF93P35789 620 aaPredicted RBP2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 SNCAP37840 140 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 PPICP45877 212 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 RPL34P49207 117 aaKnown RBP2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ATP4BP51164 291 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 LIM2P55344 173 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ARPP19P56211 112 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 B3GALT5-AS1P59052 145 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 TPPP2P59282 170 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 BTG1P62324 171 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 MYL5Q02045 173 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ZNF92Q03936 586 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ARFRP1Q13795 201 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 HMGN3Q15651 99 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 LGALSLQ3ZCW2 172 aaPredicted RBP2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 TCEAL5Q5H9L2 206 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ZNF705AQ6ZN79 300 aaPredicted RBP2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 NOTCH2NLQ7Z3S9 236 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 CEACAM19Q7Z692 300 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ZCCHC24Q8N2G6 241 aaKnown RBP2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 PHLDA1Q8WV24 401 aaPredicted RBP2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 C10orf82Q8WW14 230 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 PSMF1Q92530 271 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ELSPBP1Q96BH3 223 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 C18orf12Q96KH6 178 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 C4orf45Q96LM5 186 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 CARD19Q96LW7 228 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 ERMAPQ96PL5 475 aaPredicted RBP2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 GINS4Q9BRT9 223 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 SFXN3Q9BWM7 321 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 LIME1Q9H400 295 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 MARCH5Q9NX47 278 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 KCNIP1Q9NZI2 227 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 LINC00312Q9Y6C7 94 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 MAST2Q6P0Q8 1798 aa2.77□□□□□ -1.97
FNDC3B-209ENST00000478016 MYH4Q9Y623 1939 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 LAMA3Q16787 3333 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 TRAV8-4A0A0B4J246 113 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 TCRBV3S1A0A5B6 114 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 C7orf71A4D174 169 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 IZUMO1RA6ND01 250 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 C8orf87E5RJ46 101 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 M0R233 179 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 RER1O15258 196 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 P01737 135 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 SOD3P08294 240 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 SPINK8P0C7L1 97 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 CCL1P22362 96 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 CRYGSP22914 178 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 MYCNOSP40205 109 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 CA7P43166 264 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 NUDT2P50583 147 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 SLC25A1P53007 311 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 NDUFV3P56181 108 aaKnown RBP2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 SEC61BP60468 96 aaKnown RBP2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 HBG1P69891 147 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 HBG2P69892 147 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 KRTAP1-1Q07627 177 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 DAZ2Q13117 558 aaKnown RBP2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 MMDQ15546 238 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 TDRG1Q3Y452 100 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 MEIG1Q5JSS6 88 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 KLF17Q5JT82 389 aaPredicted RBP2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 Q6AWC8 147 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 MRPL54Q6P161 138 aaKnown RBP2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 ALKAL2Q6UX46 152 aa2.76□□□□□ -1.97
FNDC3B-209ENST00000478016 HEPN1Q6WQI6 88 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms