RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 NUDT19A8MXV4 375 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 RBFOX2O43251 390 aaKnown RBP eCLIP13.75□□□□□ -0.21
PTPN7-209ENST00000477554 DUS4LO95620 317 aaKnown RBP13.75□□□□□ -0.21
PTPN7-209ENST00000477554 CA2P00918 260 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 SERPINE2P07093 398 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 RPA2P15927 270 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 CD33P20138 364 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 VDAC1P21796 283 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 UCP1P25874 307 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 SRPXP78539 464 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 FOXE3Q13461 319 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 SPAG16Q8N0X2 631 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 RNF152Q8N8N0 203 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 OR4S2Q8NH73 311 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 OR5B12Q96R08 314 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 TP53RKQ96S44 253 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 SEC22CQ9BRL7 303 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 TMEM222Q9H0R3 208 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 GNB4Q9HAV0 340 aa13.75□□□□□ -0.21
PTPN7-209ENST00000477554 TRAV41A0A0B4J266 112 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 C7orf66A4D0T2 115 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 FCGR3BO75015 233 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 CRYGBP07316 175 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 BRWD1-AS2P59051 145 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 TMEM187Q14656 261 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 PLGLAQ15195 96 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 SP6Q3SY56 376 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 OR2B11Q5JQS5 317 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 PDPNQ86YL7 162 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 ZNF695Q8IW36 515 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 OR52B4Q8NGK2 314 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 COQ8AQ8NI60 647 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 MYOZ3Q8TDC0 251 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 GLYATL2Q8WU03 294 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 P2RX4Q99571 388 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 PHB2Q99623 299 aa13.74□□□□□ -0.21
PTPN7-209ENST00000477554 HPRT1P00492 218 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 IGLV1-40P01703 118 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 KRTAP10-11P60412 298 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 MITD1Q8WV92 249 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 ALG5Q9Y673 324 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 A0A0B4J293 547 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 A0A0B4J2A0 478 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 ATG12O94817 140 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 CDS2O95674 445 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 HOXD3P31249 432 aaPredicted RBP13.73□□□□□ -0.21
PTPN7-209ENST00000477554 CXorf66Q5JRM2 361 aaPredicted RBP13.73□□□□□ -0.21
PTPN7-209ENST00000477554 LGI3Q8N145 548 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 LRTM2Q8N967 370 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 IL22RA2Q969J5 263 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 FLYWCH2Q96CP2 140 aaKnown RBP13.73□□□□□ -0.21
PTPN7-209ENST00000477554 TMEM56Q96MV1 263 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 AIFM2Q9BRQ8 373 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 PLEKHA2Q9HB19 425 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 ZFP57Q9NU63 452 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 SHPKQ9UHJ6 478 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 TMEM56-RWDD3S4R434 201 aa13.73□□□□□ -0.21
PTPN7-209ENST00000477554 A0A1W2PN81 502 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 RAMP3O60896 148 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 ELANEP08246 267 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 CHRNA7P36544 502 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 LPAR6P43657 344 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 GNB1P62873 340 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 DEFA5Q01523 94 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 ZNF585BQ52M93 769 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 ASPHD1Q5U4P2 390 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 C12orf45Q8N5I9 185 aaPredicted RBP13.72□□□□□ -0.21
PTPN7-209ENST00000477554 COMMD1Q8N668 190 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 LFNGQ8NES3 379 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 OSR1Q8TAX0 266 aaPredicted RBP13.72□□□□□ -0.21
PTPN7-209ENST00000477554 ABHD5Q8WTS1 349 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 RBPMSQ93062 196 aaKnown RBP13.72□□□□□ -0.21
PTPN7-209ENST00000477554 HARBI1Q96MB7 349 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 ZNF580Q9UK33 172 aa13.72□□□□□ -0.21
PTPN7-209ENST00000477554 DUXBA0A1W2PPF3 345 aa13.71□□□□□ -0.22
PTPN7-209ENST00000477554 CCL24O00175 119 aa13.71□□□□□ -0.22
PTPN7-209ENST00000477554 CRYZL1O95825 349 aa13.71□□□□□ -0.22
PTPN7-209ENST00000477554 APELAP0DMC3 54 aa13.71□□□□□ -0.22
PTPN7-209ENST00000477554 CDX1P47902 265 aaPredicted RBP13.71□□□□□ -0.22
PTPN7-209ENST00000477554 CRIP2P52943 208 aaPredicted RBP13.71□□□□□ -0.22
PTPN7-209ENST00000477554 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.22
PTPN7-209ENST00000477554 TMEM177Q53S58 311 aa13.71□□□□□ -0.22
PTPN7-209ENST00000477554 ZNF491Q8N8L2 437 aa13.71□□□□□ -0.22
PTPN7-209ENST00000477554 GRPEL2Q8TAA5 225 aa13.71□□□□□ -0.22
PTPN7-209ENST00000477554 RNF5Q99942 180 aa13.71□□□□□ -0.22
PTPN7-209ENST00000477554 AURKAIP1Q9NWT8 199 aaPredicted RBP13.71□□□□□ -0.22
PTPN7-209ENST00000477554 COMMD9Q9P000 198 aa13.71□□□□□ -0.22
PTPN7-209ENST00000477554 TNCP24821 2201 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 SSNA1O43805 119 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 HRASP01112 189 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 NQO2P16083 231 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 RAB9AP51151 201 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 TMEM268Q5VZI3 342 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 ZNF562Q6V9R5 426 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 PPP1R27Q86WC6 154 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 SELENOHQ8IZQ5 122 aaKnown RBP13.7□□□□□ -0.22
PTPN7-209ENST00000477554 VKORC1L1Q8N0U8 176 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 UXS1Q8NBZ7 420 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 MS4A10Q96PG2 267 aa13.7□□□□□ -0.22
PTPN7-209ENST00000477554 TSNAXQ99598 290 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms