RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	SYNGR2	O43760	224 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	ANGPTL7	O43827	346 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	CST7	O76096	145 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	IGLV2-14	P01704	120 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	IGHV4-34	P06331	123 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	LIPF	P07098	398 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	AREG	P15514	252 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	HTR1D	P28221	377 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	KIR2DS4	P43632	304 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	ZNF83	P51522	516 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	PAX9	P55771	341 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	TCTA	P57738	103 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	CLDN2	P57739	230 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	TGFBR3	Q03167	851 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	SQSTM1	Q13501	440 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	KIR2DS1	Q14954	304 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	KISS1	Q15726	138 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	GABRA6	Q16445	453 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	RTL8B	Q17RB0	113 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	PMS2CL	Q68D20	193 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	RNF44	Q7L0R7	432 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	ATP5L2	Q7Z4Y8	100 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	SPATA12	Q7Z6I5	190 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	BPIFA4P	Q86YQ2	179 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	SAXO1	Q8IYX7	474 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	TTC9C	Q8N5M4	171 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	C8orf46	Q8TAG6	207 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	TSKU	Q8WUA8	353 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	BLNK	Q8WV28	456 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	TMEM190	Q8WZ59	177 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	C11orf52	Q96A22	123 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	TM4SF19	Q96DZ7	209 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	ADAT3	Q96EY9	351 aa	Predicted RBP	3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	AMELY	Q99218	206 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	C6orf106	Q9H6K1	298 aa	Predicted RBP	3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	ZNF160	Q9HCG1	818 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	NPVF	Q9HCQ7	196 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	LANCL2	Q9NS86	450 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	MED29	Q9NX70	200 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	PSENEN	Q9NZ42	101 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	ZNF391	Q9UJN7	358 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	HSPB8	Q9UJY1	196 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	BOK	Q9UMX3	212 aa	Predicted RBP	3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	YTHDF2	Q9Y5A9	579 aa	Known RBP	3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	SOX21	Q9Y651	276 aa	Predicted RBP	3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	VCAN	P13611	3396 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	CNOT1	A5YKK6	2376 aa	Known RBP	3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	PIEZO1	Q92508	2521 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520		A0A087WV48	116 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	TRGV10	A0A0A0MS01	117 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	TRAV34	A0A0B4J273	112 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	MUC21	A0A0G2JKD1	596 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	MUC21	A0A140T8X8	626 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520		A0A1W2PQD3	144 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	MED19	A0JLT2	244 aa	Predicted RBP	3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	ODAM	A1E959	279 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM231B	A6NCW3	169 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	OR4C46	A6NHA9	309 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	C10orf142	B7Z368	130 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520		G3V3Y1	287 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	IFNL4	K9M1U5	179 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520		M0R2Z0	102 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	SH2D1B	O14796	132 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	TNFSF14	O43557	240 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	PAGE4	O60829	102 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	SAP30	O75446	220 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	OR2J3	O76001	311 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	MPZL1	O95297	269 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	CXorf1	O96002	111 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	PPY	P01298	95 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	APCS	P02743	223 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	SERPINE2	P07093	398 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	COX8A	P10176	69 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	HIST1H1E	P10412	219 aa	Known RBP	3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	ZNF17	P17021	662 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	PGC	P20142	388 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	CBLN1	P23435	193 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	PTGDS	P41222	190 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	GPR12	P47775	334 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	EMD	P50402	254 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	ARF1	P84077	181 aa	Known RBP	3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	ID2	Q02363	134 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	SMAGP	Q0VAQ4	97 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	MGAT2	Q10469	447 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	FUT7	Q11130	342 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	IGFBP7	Q16270	282 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	POU2AF1	Q16633	256 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	VWC2	Q2TAL6	325 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	SP6	Q3SY56	376 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	CXorf66	Q5JRM2	361 aa	Predicted RBP	3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	MUC21	Q5SSG8	566 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	PLCXD3	Q63HM9	321 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	ACSM6	Q6P461	480 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	TMEM136	Q6ZRR5	245 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	C1QL2	Q7Z5L3	287 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	DOLPP1	Q86YN1	238 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	ODF3L1	Q8IXM7	274 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	MMD2	Q8IY49	270 aa		3.92	□□□□□ -1.78
PTCD3-212	ENST00000477520	RPP25L	Q8N5L8	163 aa	Known RBP	3.92	□□□□□ -1.78

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