RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 DEFA3P59666 94 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 PJVKQ0ZLH3 352 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 ECSCRQ19T08 205 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 KLK9Q2XQG4 91 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 BEAN1Q3B7T3 259 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 MZT2BQ6NZ67 158 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 MRPL41Q8IXM3 137 aaKnown RBP9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 CCDC71LQ8N9Z2 235 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 SRSF12Q8WXF0 261 aaKnown RBP9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 RBMXL1Q96E39 390 aaKnown RBP9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 USMG5Q96IX5 58 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 CLCC1Q96S66 551 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 RTBDNQ9BSG5 229 aaPredicted RBP9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 KLK15Q9H2R5 256 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 C5orf66Q9H5L9 145 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 ZNF430Q9H8G1 570 aaPredicted RBP9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 KLK9Q9UKQ9 250 aa9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 C14orf166Q9Y224 244 aaKnown RBP9.62□□□□□ -0.87
CLCNKA-205ENST00000477360 RAMP3O60896 148 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 OR8U8P0C7N1 319 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 RPA2P15927 270 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 CCR6P51684 374 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 PIGPP57054 158 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 UBE2MP61081 183 aaKnown RBP9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 RPL8P62917 257 aaKnown RBP9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 DCTN2Q13561 401 aaKnown RBP9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 HSD17B13Q7Z5P4 300 aaPredicted RBP9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 TTC9CQ8N5M4 171 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 DUSP18Q8NEJ0 188 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 GRPEL2Q8TAA5 225 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 GALNT14Q96FL9 552 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 RAX2Q96IS3 184 aa9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 ALX4Q9H161 411 aaPredicted RBP9.61□□□□□ -0.87
CLCNKA-205ENST00000477360 LINC00854A0A1B0GVQ3 168 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 MSGN1A6NI15 193 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 CRYM-AS1A6NIL9 109 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 MPPED1O15442 326 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 TNFSF12O43508 249 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 TCRBP04435 133 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 RLN1P04808 185 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 LGALS1P09382 135 aaKnown RBP9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 MECP2P51608 486 aaKnown RBP9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 DHODHQ02127 395 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 ZNF616Q08AN1 781 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 TNXAQ16473 311 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 ASPHD1Q5U4P2 390 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 OR4A47Q6IF82 309 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 TBC1D26Q86UD7 250 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 CENPSQ8N2Z9 138 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 ADAD2Q8NCV1 583 aaKnown RBP9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 TMEM230Q96A57 120 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 FAM103A1Q9BTL3 118 aaKnown RBP9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 ZNF257Q9Y2Q1 563 aa9.6□□□□□ -0.87
CLCNKA-205ENST00000477360 PLXNB1O43157 2135 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 FAM240BA0A1B0GVZ2 78 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 FAM223BA6NKX1 122 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 NPIPB5A8MRT5 1133 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 H0Y980 276 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 DHFRP00374 187 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 CRYGCP07315 174 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 OR9G9P0C7N8 305 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 HLA-GP17693 338 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 RPL27AP46776 148 aaKnown RBP9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 INSL3P51460 131 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 ERVK-16P61578 105 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 GNB1P62873 340 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 PHLDA2Q53GA4 152 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 TMEM128Q5BJH2 165 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 OR2B11Q5JQS5 317 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 HIST2H2BDQ6DRA6 164 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 LCNL1Q6ZST4 164 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 FAM223AQ8IWN6 122 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 OR1N2Q8NGR9 330 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 OR51H1Q8NH63 302 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 FKBP11Q9NYL4 201 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 TNCP24821 2201 aa9.59□□□□□ -0.87
CLCNKA-205ENST00000477360 TRBV9A0A0B4J1U6 114 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 C3orf85A0A1B0GTC6 90 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 MARCH11A6NNE9 402 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 TEX22C9J3V5 150 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 UPK2O00526 184 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 ATG12O94817 140 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 PTTG1O95997 202 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 TRGV3P03979 118 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 PI3P19957 117 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 UCP1P25874 307 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 TPPP2P59282 170 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 ZNF585BQ52M93 769 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 SGPP2Q8IWX5 399 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 OR11H1Q8NG94 326 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 DPF1Q92782 380 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 PHB2Q99623 299 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 C20orf85Q9H1P6 137 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 NAA60Q9H7X0 242 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 GNB4Q9HAV0 340 aa9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 RANGRFQ9HD47 186 aaPredicted RBP9.58□□□□□ -0.88
CLCNKA-205ENST00000477360 PIGBOS1A0A0B4J2F0 54 aa9.57□□□□□ -0.88
CLCNKA-205ENST00000477360 G3V4G9 280 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms