RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 SLC35G3Q8N808 338 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 LRTM2Q8N967 370 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 GRPEL2Q8TAA5 225 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 CITED2Q99967 270 aaPredicted RBP11.3□□□□□ -0.6
CCNL1-217ENST00000476367 SEC22CQ9BRL7 303 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 NSG2Q9Y328 171 aa11.3□□□□□ -0.6
CCNL1-217ENST00000476367 G3V318 75 aa11.29□□□□□ -0.6
CCNL1-217ENST00000476367 UPK2O00526 184 aa11.29□□□□□ -0.6
CCNL1-217ENST00000476367 CNIH1O95406 144 aa11.29□□□□□ -0.6
CCNL1-217ENST00000476367 PTTG1O95997 202 aa11.29□□□□□ -0.6
CCNL1-217ENST00000476367 SLC35B1P78383 322 aa11.29□□□□□ -0.6
CCNL1-217ENST00000476367 ASPHD1Q5U4P2 390 aa11.29□□□□□ -0.6
CCNL1-217ENST00000476367 TMEM268Q5VZI3 342 aa11.29□□□□□ -0.6
CCNL1-217ENST00000476367 ARPC1AQ92747 370 aa11.29□□□□□ -0.6
CCNL1-217ENST00000476367 RBPMSQ93062 196 aaKnown RBP11.29□□□□□ -0.6
CCNL1-217ENST00000476367 KCNIP3Q9Y2W7 256 aa11.29□□□□□ -0.6
CCNL1-217ENST00000476367 A0A1W2PRX2 142 aa11.28□□□□□ -0.6
CCNL1-217ENST00000476367 HLA-AP01891 365 aaKnown RBP11.28□□□□□ -0.6
CCNL1-217ENST00000476367 IGF1P05019 195 aa11.28□□□□□ -0.6
CCNL1-217ENST00000476367 FXYD3Q14802 87 aa11.28□□□□□ -0.6
CCNL1-217ENST00000476367 TNXAQ16473 311 aa11.28□□□□□ -0.6
CCNL1-217ENST00000476367 TRIM16LQ309B1 348 aa11.28□□□□□ -0.6
CCNL1-217ENST00000476367 NSUN5P1Q3KNT7 163 aa11.28□□□□□ -0.6
CCNL1-217ENST00000476367 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
CCNL1-217ENST00000476367 TCTEX1D4Q5JR98 221 aa11.28□□□□□ -0.6
CCNL1-217ENST00000476367 DMBX1Q8NFW5 382 aa11.28□□□□□ -0.6
CCNL1-217ENST00000476367 CASTOR1Q8WTX7 329 aa11.28□□□□□ -0.6
CCNL1-217ENST00000476367 TRAV41A0A0B4J266 112 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 MPTX1A8MV57 137 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 DUS4LO95620 317 aaKnown RBP11.27□□□□□ -0.6
CCNL1-217ENST00000476367 CRIP2P52943 208 aaPredicted RBP11.27□□□□□ -0.6
CCNL1-217ENST00000476367 CFHR3Q02985 330 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 OXA1LQ15070 435 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 PLET1Q6UQ28 207 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 LCNL1Q6ZST4 164 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 MITD1Q8WV92 249 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 IL22RA2Q969J5 263 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 GPR146Q96CH1 333 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 GON7Q9BXV9 100 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 TMEM14BQ9NUH8 114 aa11.27□□□□□ -0.6
CCNL1-217ENST00000476367 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
CCNL1-217ENST00000476367 TEX22C9J3V5 150 aa11.27□□□□□ -0.61
CCNL1-217ENST00000476367 INMT-MINDY4F8WBC2 141 aa11.27□□□□□ -0.61
CCNL1-217ENST00000476367 IL5P05113 134 aa11.27□□□□□ -0.61
CCNL1-217ENST00000476367 C2orf68Q2NKX9 166 aa11.27□□□□□ -0.61
CCNL1-217ENST00000476367 C4orf46Q504U0 113 aa11.27□□□□□ -0.61
CCNL1-217ENST00000476367 VSTM2AQ8TAG5 236 aa11.27□□□□□ -0.61
CCNL1-217ENST00000476367 A0A0B4J2A0 478 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 A0A1W2PN81 502 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 M0QZ24 198 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 SOX15O60248 233 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 CREBL2O60519 120 aaPredicted RBP11.26□□□□□ -0.61
CCNL1-217ENST00000476367 ADAP1O75689 374 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 ACTL6BO94805 426 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 TSPAN15O95858 294 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 FGF2P09038 288 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 APELAP0DMC3 54 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
CCNL1-217ENST00000476367 CHRNA7P36544 502 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 OR2B8PP59922 312 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 ERVK-16P61578 105 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 RPL8P62917 257 aaKnown RBP11.26□□□□□ -0.61
CCNL1-217ENST00000476367 CD83Q01151 205 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 AARDQ4LEZ3 155 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 TEX38Q6PEX7 206 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 UNQ5815/PRO19632Q6UWF5 114 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 ZNF695Q8IW36 515 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 MMD2Q8IY49 270 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 LFNGQ8NES3 379 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 OR4A5Q8NH83 315 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 SGMS2Q8NHU3 365 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 LSM10Q969L4 123 aaKnown RBP11.26□□□□□ -0.61
CCNL1-217ENST00000476367 SHPKQ9UHJ6 478 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
CCNL1-217ENST00000476367 PKD1L1Q8TDX9 2849 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 C15orf61A6NNL5 157 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 OPN1MWP04001 364 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 OPN1MW2P0DN77 364 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 OPN1MW3P0DN78 364 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 HLA-GP17693 338 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 H2BFWTQ7Z2G1 175 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 NDUFA11Q86Y39 141 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 LGI3Q8N145 548 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 COMMD1Q8N668 190 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 ZNF431Q8TF32 576 aaPredicted RBP11.25□□□□□ -0.61
CCNL1-217ENST00000476367 SRSF12Q8WXF0 261 aaKnown RBP11.25□□□□□ -0.61
CCNL1-217ENST00000476367 PHB2Q99623 299 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 AIFM2Q9BRQ8 373 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 WNK1Q9H4A3 2382 aa11.25□□□□□ -0.61
CCNL1-217ENST00000476367 TEX50A0A1B0GTY4 177 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 ADARB2-AS1A8MUL3 147 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 PITX3O75364 302 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 IGHG4P01861 327 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
CCNL1-217ENST00000476367 PF4V1P10720 104 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 ANXA3P12429 323 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 AKR1C2P52895 323 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 TMEM267Q0VDI3 215 aaPredicted RBP11.24□□□□□ -0.61
CCNL1-217ENST00000476367 RGS21Q2M5E4 152 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 CXorf66Q5JRM2 361 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms