RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 DEFA4P12838 97 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 HAAOP46952 286 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 RAB14P61106 215 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 TNFAIP6P98066 277 aaPredicted RBP1.01□□□□□ -2.25
LTN1-204ENST00000475344 CAV1Q03135 178 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 LRRN1Q6UXK5 716 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 HIST2H3AQ71DI3 136 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 TMEM86AQ8N2M4 240 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 RPP25LQ8N5L8 163 aaKnown RBP1.01□□□□□ -2.25
LTN1-204ENST00000475344 MBD3L1Q8WWY6 194 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 ROPN1LQ96C74 230 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 HSPB9Q9BQS6 159 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 CHST6Q9GZX3 395 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 CST9LQ9H4G1 147 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 FGFR1OP2Q9NVK5 253 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 PXMP4Q9Y6I8 212 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 DOCK5Q9H7D0 1870 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 MAP3K5Q99683 1374 aa1□□□□□ -2.25
LTN1-204ENST00000475344 TENM3Q9P273 2699 aa1□□□□□ -2.25
LTN1-204ENST00000475344 TRAV38-1A0A0B4J264 116 aa1□□□□□ -2.25
LTN1-204ENST00000475344 TMEM269A0A1B0GVZ9 245 aa1□□□□□ -2.25
LTN1-204ENST00000475344 OR51F1A6NGY5 319 aa1□□□□□ -2.25
LTN1-204ENST00000475344 PLA2G10O15496 165 aa1□□□□□ -2.25
LTN1-204ENST00000475344 NSA2O95478 260 aaKnown RBP1□□□□□ -2.25
LTN1-204ENST00000475344 CCL5P13501 91 aa1□□□□□ -2.25
LTN1-204ENST00000475344 UCHL3P15374 230 aa1□□□□□ -2.25
LTN1-204ENST00000475344 GPX2P18283 190 aa1□□□□□ -2.25
LTN1-204ENST00000475344 MAP2K4P45985 399 aa1□□□□□ -2.25
LTN1-204ENST00000475344 RPL28P46779 137 aaKnown RBP1□□□□□ -2.25
LTN1-204ENST00000475344 RPL30P62888 115 aaKnown RBP1□□□□□ -2.25
LTN1-204ENST00000475344 NNATQ16517 81 aa1□□□□□ -2.25
LTN1-204ENST00000475344 TMEM155Q4W5P6 130 aa1□□□□□ -2.25
LTN1-204ENST00000475344 TNFAIP8L3Q5GJ75 292 aa1□□□□□ -2.25
LTN1-204ENST00000475344 UNQ6190/PRO20217Q6UXQ8 127 aa1□□□□□ -2.25
LTN1-204ENST00000475344 SSX8Q7RTT4 187 aa1□□□□□ -2.25
LTN1-204ENST00000475344 DCXRQ7Z4W1 244 aa1□□□□□ -2.25
LTN1-204ENST00000475344 RPS19BP1Q86WX3 136 aaKnown RBP1□□□□□ -2.25
LTN1-204ENST00000475344 TBC1D19Q8N5T2 526 aa1□□□□□ -2.25
LTN1-204ENST00000475344 RAB8BQ92930 207 aa1□□□□□ -2.25
LTN1-204ENST00000475344 TESCQ96BS2 214 aa1□□□□□ -2.25
LTN1-204ENST00000475344 RETNLBQ9BQ08 111 aa1□□□□□ -2.25
LTN1-204ENST00000475344 MED9Q9NWA0 146 aa1□□□□□ -2.25
LTN1-204ENST00000475344 NKIRAS1Q9NYS0 192 aa1□□□□□ -2.25
LTN1-204ENST00000475344 C3orf18Q9UK00 162 aa1□□□□□ -2.25
LTN1-204ENST00000475344 SMARCA4P51532 1647 aa1□□□□□ -2.25
LTN1-204ENST00000475344 SCAF11Q99590 1463 aaKnown RBP0.99□□□□□ -2.25
LTN1-204ENST00000475344 A0A0D9SEW6 157 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 TRBV6-5A0A0K0K1A5 114 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 TRAPPC13A5PLN9 417 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 LRRN3E7EW58 273 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 H3BT86 120 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 LST1O00453 97 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 MRPS14O60783 128 aaKnown RBP0.99□□□□□ -2.25
LTN1-204ENST00000475344 C1QAP02745 245 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 MSNP26038 577 aaKnown RBP0.99□□□□□ -2.25
LTN1-204ENST00000475344 EMX1Q04741 257 aaPredicted RBP0.99□□□□□ -2.25
LTN1-204ENST00000475344 FABP9Q0Z7S8 132 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 ELOBQ15370 118 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 CLVS2Q5SYC1 327 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 SLC36A1Q7Z2H8 476 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 ZNF550Q7Z398 422 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 GID4Q8IVV7 300 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 XPNPEP1Q9NQW7 623 aa0.99□□□□□ -2.25
LTN1-204ENST00000475344 SOX21Q9Y651 276 aaPredicted RBP0.99□□□□□ -2.25
LTN1-204ENST00000475344 C9orf84Q5VXU9 1444 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 FLT4P35916 1363 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 EVC2Q86UK5 1308 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 IGKV2-40A0A087WW87 121 aaPredicted RBP0.98□□□□□ -2.25
LTN1-204ENST00000475344 IGKV3D-7A0A0C4DH55 119 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 IGKV3OR2-268A0A0C4DH90 116 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 A0A1B0GV50 99 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 MEIS3P1A6NDR6 274 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 IGKV2D-40P01614 121 aaPredicted RBP0.98□□□□□ -2.25
LTN1-204ENST00000475344 RPSAP08865 295 aaKnown RBP0.98□□□□□ -2.25
LTN1-204ENST00000475344 FGF6P10767 208 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 IL9P15248 144 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 NFYAP23511 347 aaPredicted RBP0.98□□□□□ -2.25
LTN1-204ENST00000475344 CSN1S1P47710 185 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 MARCKSL1P49006 195 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 RAB13P51153 203 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 KRTAP10-4P60372 401 aaPredicted RBP0.98□□□□□ -2.25
LTN1-204ENST00000475344 NDUFA5Q16718 116 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 Q1T7F1 81 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 SFXN4Q6P4A7 337 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 GPR32P1Q8NGA4 272 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 C10orf105Q8TEF2 133 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 DIRAS2Q96HU8 199 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 Q96M85 177 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 OR51I1Q9H343 314 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 ANGPT4Q9Y264 503 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 DCCP43146 1447 aa0.98□□□□□ -2.25
LTN1-204ENST00000475344 INMT-MINDY4F8WBC2 141 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 I3L521 148 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 LEPROTO15243 131 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 TGOLN2O43493 480 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 NOS1APO75052 506 aaPredicted RBP0.97□□□□□ -2.25
LTN1-204ENST00000475344 CRPP02741 224 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 SRP19P09132 144 aaKnown RBP0.97□□□□□ -2.25
LTN1-204ENST00000475344 LYNX1P0DP58 116 aa0.97□□□□□ -2.25
LTN1-204ENST00000475344 CCR7P32248 378 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms