RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 RPL8P62917 257 aaKnown RBP9.31□□□□□ -0.92
SKA3-206ENST00000475251 OR2B11Q5JQS5 317 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 LIPKQ5VXJ0 399 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 C19orf35Q6ZS72 473 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 OR4A5Q8NH83 315 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 C2CD4CQ8TF44 421 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 TCTEX1D2Q8WW35 142 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 TMEM190Q8WZ59 177 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 TMEM203Q969S6 136 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 RARRES2Q99969 163 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 ZNF436Q9C0F3 470 aaPredicted RBP9.31□□□□□ -0.92
SKA3-206ENST00000475251 C11orf68Q9H3H3 251 aaKnown RBP9.31□□□□□ -0.92
SKA3-206ENST00000475251 FBXL17Q9UF56 701 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 OR2W1Q9Y3N9 320 aa9.31□□□□□ -0.92
SKA3-206ENST00000475251 A0A075B6Q4 140 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 METTL21EPA6NDL7 271 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 MFSD2BA6NFX1 497 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 MPTX1A8MV57 137 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 E7EUB6 86 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 HLA-GP17693 338 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 DTYMKP23919 212 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 PTBP1P26599 531 aaKnown RBP eCLIP9.3□□□□□ -0.92
SKA3-206ENST00000475251 ODF3L2Q3SX64 289 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 LAIR2Q6ISS4 152 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 LINC00336Q6ZUF6 198 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 ZNF502Q8TBZ5 544 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 SRSF8Q9BRL6 282 aaKnown RBP9.3□□□□□ -0.92
SKA3-206ENST00000475251 CSTL1Q9H114 145 aa9.3□□□□□ -0.92
SKA3-206ENST00000475251 KIAA1109Q2LD37 5005 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 J3QRK9 145 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 TGOLN2O43493 480 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 HLA-DQB1P01920 261 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 REG1AP05451 166 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 GNAO1P09471 354 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 RAB6AP20340 208 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 CALRP27797 417 aaKnown RBP9.29□□□□□ -0.92
SKA3-206ENST00000475251 RPL30P62888 115 aaKnown RBP9.29□□□□□ -0.92
SKA3-206ENST00000475251 IRF3Q14653 427 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 ZNF66Q6ZN08 573 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 TMEM91Q6ZNR0 172 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 VN1R17PQ8TDU5 208 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 BSCL2Q96G97 398 aaPredicted RBP9.29□□□□□ -0.92
SKA3-206ENST00000475251 BET1LQ9NYM9 111 aa9.29□□□□□ -0.92
SKA3-206ENST00000475251 LSM2Q9Y333 95 aaKnown RBP9.29□□□□□ -0.92
SKA3-206ENST00000475251 IGHV3-35A0A0C4DH35 117 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 A0A1B0GW64 132 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 C11orf94C9JXX5 98 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 RAB27BO00194 218 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 PDCD5O14737 125 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 FCGR2BP31994 310 aaPredicted RBP9.28□□□□□ -0.92
SKA3-206ENST00000475251 ADMP35318 185 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 NANOS2P60321 138 aaKnown RBP9.28□□□□□ -0.92
SKA3-206ENST00000475251 HES5Q5TA89 166 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 THOC7Q6I9Y2 204 aaKnown RBP9.28□□□□□ -0.92
SKA3-206ENST00000475251 SPSB3Q6PJ21 355 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 OR5B3Q8NH48 314 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 CD300LFQ8TDQ1 290 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 ATP6V0BQ99437 205 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 HRASLSQ9HDD0 168 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 SCN3BQ9NY72 215 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 SPATA2Q9UM82 520 aa9.28□□□□□ -0.92
SKA3-206ENST00000475251 IGKV1D-8A0A087WSZ0 117 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 PTGES3LE9PB15 166 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 K7EMT4 169 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 NDUFA4O00483 81 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 IGLV2-14P01704 120 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 HSMCR30P0CW71 290 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 MED14OSP0DP75 135 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 NFYAP23511 347 aaPredicted RBP9.27□□□□□ -0.93
SKA3-206ENST00000475251 RPS25P62851 125 aaKnown RBP9.27□□□□□ -0.93
SKA3-206ENST00000475251 SSX9Q7RTT3 188 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 HSD17B13Q7Z5P4 300 aaPredicted RBP9.27□□□□□ -0.93
SKA3-206ENST00000475251 MFSD4AQ8N468 514 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 OR11H2Q8NH07 326 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 COMMD5Q9GZQ3 224 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 DCSTAMPQ9H295 470 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 ACOT13Q9NPJ3 140 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 TAS2R8Q9NYW2 309 aa9.27□□□□□ -0.93
SKA3-206ENST00000475251 C15orf62A8K5M9 175 aa9.26□□□□□ -0.93
SKA3-206ENST00000475251 MRPS14O60783 128 aaKnown RBP9.26□□□□□ -0.93
SKA3-206ENST00000475251 CTSDP07339 412 aaPredicted RBP9.26□□□□□ -0.93
SKA3-206ENST00000475251 FGF2P09038 288 aa9.26□□□□□ -0.93
SKA3-206ENST00000475251 RPA2P15927 270 aa9.26□□□□□ -0.93
SKA3-206ENST00000475251 OR2B8PP59922 312 aa9.26□□□□□ -0.93
SKA3-206ENST00000475251 PLA2G7Q13093 441 aa9.26□□□□□ -0.93
SKA3-206ENST00000475251 TIMM50Q3ZCQ8 353 aa9.26□□□□□ -0.93
SKA3-206ENST00000475251 CNIH2Q6PI25 160 aa9.26□□□□□ -0.93
SKA3-206ENST00000475251 C20orf24Q9BUV8 137 aa9.26□□□□□ -0.93
SKA3-206ENST00000475251 CCDC90BQ9GZT6 254 aa9.26□□□□□ -0.93
SKA3-206ENST00000475251 IGLC7A0M8Q6 106 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 OR2T8A6NH00 312 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 IFITM5A6NNB3 132 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 IGLL5B9A064 214 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 RBFOX2O43251 390 aaKnown RBP eCLIP9.25□□□□□ -0.93
SKA3-206ENST00000475251 S1PR2O95136 353 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 MFAP2P55001 183 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 TAS2R31P59538 309 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 MLLT11Q13015 90 aaPredicted RBP9.25□□□□□ -0.93
SKA3-206ENST00000475251 EIF4EBP1Q13541 118 aaPredicted RBP9.25□□□□□ -0.93
SKA3-206ENST00000475251 MSMO1Q15800 293 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms