RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TMEM45BQ96B21 275 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 NABP2Q9BQ15 211 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 JPT1Q9UK76 154 aa9.33□□□□□ -0.92
VAPB-204ENST00000475243 TRBV5-7A0A0A0MS05 114 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 NPFFO15130 113 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 EGR4Q05215 589 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 LBHQ53QV2 105 aaPredicted RBP9.32□□□□□ -0.92
VAPB-204ENST00000475243 Q6ZT83 130 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 TMEM54Q969K7 222 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 FBXL15Q9H469 300 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 WNK3Q9BYP7 1800 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 B9A039 149 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 RBFOX2O43251 390 aaKnown RBP eCLIP9.32□□□□□ -0.928e-6■■□□□ 11.5
VAPB-204ENST00000475243 FOXH1O75593 365 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 IGKV1D-33P01593 117 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 IGKV1-33P01594 117 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 PPP1R32Q7Z5V6 425 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 DMRTA2Q96SC8 542 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 RALGAPA2Q2PPJ7 1873 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 RND3P61587 244 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 OR4D5Q8NGN0 318 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 OR5P3Q8WZ94 311 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
VAPB-204ENST00000475243 TMEM186Q96B77 213 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 C18orf15Q96N68 181 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
VAPB-204ENST00000475243 TMEM160Q9NX00 188 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 CDC42EP3Q9UKI2 254 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 FOXA2Q9Y261 457 aaPredicted RBP9.32□□□□□ -0.92
VAPB-204ENST00000475243 NOTCH3Q9UM47 2321 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 M0R381 172 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 HOXB1P14653 301 aaPredicted RBP9.32□□□□□ -0.92
VAPB-204ENST00000475243 C1orf100Q5SVJ3 147 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 ZNF385CQ66K41 422 aaPredicted RBP9.32□□□□□ -0.92
VAPB-204ENST00000475243 OR1P1Q8NH06 330 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 THSD7AQ9UPZ6 1657 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 GAGE10A6NGK3 116 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 SOD3P08294 240 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 Q5BKY6 102 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 CTHRC1Q96CG8 243 aa9.32□□□□□ -0.92
VAPB-204ENST00000475243 NMBP08949 121 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 SUMO2P61956 95 aaKnown RBP9.31□□□□□ -0.92
VAPB-204ENST00000475243 SMDT1Q9H4I9 107 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 TRBV20OR9-2A0A075B6H5 130 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 ZNF146Q15072 292 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 COL5A1-AS1Q5SY13 56 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 PUSL1Q8N0Z8 303 aaKnown RBP9.31□□□□□ -0.92
VAPB-204ENST00000475243 ABHD17AQ96GS6 310 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 SFRP2Q96HF1 295 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 ABCA4P78363 2273 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 ZNF729A6NN14 1252 aaPredicted RBP9.31□□□□□ -0.92
VAPB-204ENST00000475243 COTL1Q14019 142 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 SAXO1Q8IYX7 474 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 HTN3P15516 51 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 LDLRAD4O15165 306 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 CELA3BP08861 270 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 CECR9P0C854 216 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 TMEM187Q14656 261 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 TRPM7Q96QT4 1865 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 CENPWQ5EE01 88 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 PET117Q6UWS5 81 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 TMEM106BQ9NUM4 274 aa9.31□□□□□ -0.92
VAPB-204ENST00000475243 RPS11P62280 158 aaKnown RBP eCLIP9.3□□□□□ -0.92
VAPB-204ENST00000475243 NRXN2Q9P2S2 1712 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 HLA-DQA1P01909 254 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 ACP7Q6ZNF0 438 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 IGKV1D-43A0A0B4J1Z2 117 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A10PA6NDY2 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A18PA6NE21 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A16PA6NEW6 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A20PA6NIJ5 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A8PA6NJQ4 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A7PA6NKC0 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A22PA8MWA6 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A12PA8MX19 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A5PA8MXJ8 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A23PA8MXZ1 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A15PP0C7V4 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A13PP0C7W8 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A14PP0C7W9 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM90A24PP0C7X0 464 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 FABP2P12104 132 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 TIMM23BQ5SRD1 257 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 LINC01590Q5TEZ4 76 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 TCF24Q7RTU0 167 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 CEACAM4O75871 244 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 TSPOP30536 169 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 ZXDCQ2QGD7 858 aaPredicted RBP9.3□□□□□ -0.92
VAPB-204ENST00000475243 FAM181AQ8N9Y4 354 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 OR10AG1Q8NH19 301 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 LHFPL5Q8TAF8 219 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 CHCHD2Q9Y6H1 151 aaPredicted RBP9.3□□□□□ -0.92
VAPB-204ENST00000475243 PLP1P60201 277 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 CD69Q07108 199 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 MRAP2Q96G30 205 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 AQP10Q96PS8 301 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 KIR2DL4Q99706 377 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 GPR183P32249 361 aa9.3□□□□□ -0.92
VAPB-204ENST00000475243 GLRXP35754 106 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms