RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 LDLRAD2Q5SZI1 272 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 CLEC9AQ6UXN8 241 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 C16orf82Q7Z2V1 217 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 DYNAPQ8N1N2 210 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 OR52E5Q8NH55 327 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 SLC25A33Q9BSK2 321 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 RBKSQ9H477 322 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 ZNF430Q9H8G1 570 aaPredicted RBP8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 PSENENQ9NZ42 101 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 HSPB7Q9UBY9 170 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 CDC42EP3Q9UKI2 254 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 SIGLEC9Q9Y336 463 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 KANTRA0A1W2PQU2 76 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 SRRM4A7MD48 611 aaKnown RBP8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 CHST1O43916 411 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 OR2F2O95006 317 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 IFNA10P01566 189 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 OPN1MWP04001 364 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 P0C879 139 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 OPN1MW2P0DN77 364 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 OPN1MW3P0DN78 364 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 CNTFRP26992 372 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 P2RY1P47900 373 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 SUB1P53999 127 aaKnown RBP eCLIP8.23□□□□□ -1.095e-10■■□□□ 11.8
PRPF38A-202ENST00000474048 RAB11AP62491 216 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 ID3Q02535 119 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 CD300CQ08708 224 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 EBI3Q14213 229 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 LY6EQ16553 131 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 PRSS8Q16651 343 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 C5orf64Q2M2E5 130 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 SPINK9Q5DT21 86 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 C9orf139Q6ZV77 190 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 IL17RELQ6ZVW7 336 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 HSD17B13Q7Z5P4 300 aaPredicted RBP8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 NPBQ8NG41 125 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 GRPEL2Q8TAA5 225 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 SSMEM1Q8WWF3 244 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 MFFQ9GZY8 342 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 TMEM14BQ9NUH8 114 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 TMEM160Q9NX00 188 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 TCF19Q9Y242 345 aa8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 STRAPQ9Y3F4 350 aaKnown RBP8.23□□□□□ -1.09
PRPF38A-202ENST00000474048 CCDC168Q8NDH2 2452 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 TRAV3A0A0B4J244 114 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 A0A0D9SG52 128 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 HMSDA8MTL9 139 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 FGF16O43320 207 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 PITX3O75364 302 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 TSPAN9O75954 239 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 NDUFA3O95167 84 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 CA2P00918 260 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 FSHBP01225 129 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 IGLV2-23P01705 113 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 OR8U8P0C7N1 319 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 SRD5A1P18405 259 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 RPL12P30050 165 aaKnown RBP8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 TAS2R30P59541 319 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 HBG1P69891 147 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 HBG2P69892 147 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 PRCDQ00LT1 54 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 OR2F1Q13607 317 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 C9orf152Q5JTZ5 239 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 SPANXN5Q5MJ07 72 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 SLC25A24Q6NUK1 477 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 Q6ZRM9 215 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 ACOT7LQ6ZUV0 252 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 TMEM219Q86XT9 240 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 LILRB2Q8N423 598 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 OR2C3Q8N628 320 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 RBM14Q96PK6 669 aaKnown RBP8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 TNFRSF19Q9NS68 423 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 OR5AC2Q9NZP5 309 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 HSPB11Q9Y547 144 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 WSB1Q9Y6I7 421 aa8.22□□□□□ -1.09
PRPF38A-202ENST00000474048 TRAV14DV4A0A0A6YYC5 116 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 TEX50A0A1B0GTY4 177 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 MDFIC2A0A1B0GVS7 189 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 H3BP45 60 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 KCNAB3O43448 404 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 TSC22D2O75157 780 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 COMPP49747 757 aaPredicted RBP8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 BAXQ07812 192 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 FXYD3Q14802 87 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 TMEM65Q6PI78 240 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 BCL6BQ8N143 479 aaPredicted RBP8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 ZNF418Q8TF45 676 aaPredicted RBP8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 ARPC1AQ92747 370 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 SMIM8Q96KF7 97 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 ARL6Q9H0F7 186 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 LYRM2Q9NU23 88 aaPredicted RBP8.21□□□□□ -1.1
PRPF38A-202ENST00000474048 ABCA1O95477 2261 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 BORCS7-ASMTA0A0B4J1R7 106 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 LY6G6DO95868 133 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 IGHV4-59P01825 116 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 HLA-DRB1P01911 266 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 IFNA4P05014 189 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 DEFA4P12838 97 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 NPY1RP25929 384 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms