RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 NQO2P16083 231 aa10.17□□□□□ -0.78
CHD3-209ENST00000473376 PTBP1P26599 531 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHD3-209ENST00000473376 CATR1Q13166 79 aa10.17□□□□□ -0.78
CHD3-209ENST00000473376 TIMM50Q3ZCQ8 353 aa10.17□□□□□ -0.78
CHD3-209ENST00000473376 VKORC1L1Q8N0U8 176 aa10.17□□□□□ -0.78
CHD3-209ENST00000473376 DEFB125Q8N687 156 aa10.17□□□□□ -0.78
CHD3-209ENST00000473376 PLEKHA2Q9HB19 425 aa10.17□□□□□ -0.78
CHD3-209ENST00000473376 TAS2R8Q9NYW2 309 aa10.17□□□□□ -0.78
CHD3-209ENST00000473376 MRPL27Q9P0M9 148 aaKnown RBP10.17□□□□□ -0.78
CHD3-209ENST00000473376 PPYP01298 95 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 CLEC3BP05452 202 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 AREGP15514 252 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 ATF4P18848 351 aaPredicted RBP10.16□□□□□ -0.78
CHD3-209ENST00000473376 FCGR2CP31995 323 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 OR2B8PP59922 312 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 GUCA2BQ16661 112 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 OR2B11Q5JQS5 317 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 CLEC19AQ6UXS0 136 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 WFDC3Q8IUB2 231 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 TMEM61Q8N0U2 210 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 SPAG16Q8N0X2 631 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 OR13F1Q8NGS4 319 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 LGALS14Q8TCE9 139 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 VN1R17PQ8TDU5 208 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 FAM110AQ9BQ89 295 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 Q9H521 79 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 DIABLOQ9NR28 239 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 COMMD9Q9P000 198 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 TP53TG1Q9Y2A0 90 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 RRP15Q9Y3B9 282 aaKnown RBP10.16□□□□□ -0.78
CHD3-209ENST00000473376 UFC1Q9Y3C8 167 aa10.16□□□□□ -0.78
CHD3-209ENST00000473376 J3QRK9 145 aa10.15□□□□□ -0.78
CHD3-209ENST00000473376 PSMB9P28065 219 aa10.15□□□□□ -0.78
CHD3-209ENST00000473376 CROCCP3Q8IVE0 287 aa10.15□□□□□ -0.78
CHD3-209ENST00000473376 UXS1Q8NBZ7 420 aa10.15□□□□□ -0.78
CHD3-209ENST00000473376 OR5AP2Q8NGF4 316 aa10.15□□□□□ -0.78
CHD3-209ENST00000473376 ZNF502Q8TBZ5 544 aa10.15□□□□□ -0.78
CHD3-209ENST00000473376 WDR89Q96FK6 387 aaPredicted RBP10.15□□□□□ -0.78
CHD3-209ENST00000473376 GGTLC1Q9BX51 225 aa10.15□□□□□ -0.78
CHD3-209ENST00000473376 ZNF436Q9C0F3 470 aaPredicted RBP10.15□□□□□ -0.78
CHD3-209ENST00000473376 COMMD5Q9GZQ3 224 aa10.15□□□□□ -0.78
CHD3-209ENST00000473376 C5orf66Q9H5L9 145 aa10.15□□□□□ -0.78
CHD3-209ENST00000473376 MLXQ9UH92 298 aa10.15□□□□□ -0.78
CHD3-209ENST00000473376 LOC102724200A0A096LPH7 203 aaPredicted RBP10.14□□□□□ -0.79
CHD3-209ENST00000473376 IGLC7A0M8Q6 106 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 ZNF320A2RRD8 509 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 CGB1A6NKQ9 187 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 UPK2O00526 184 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 HLA-AP01891 365 aaKnown RBP10.14□□□□□ -0.79
CHD3-209ENST00000473376 SDC2P34741 201 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 SPSB3Q6PJ21 355 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 DHRS11Q6UWP2 260 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 Q6ZWC4 215 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 OR52B4Q8NGK2 314 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 OR1L6Q8NGR2 347 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 SECTM1Q8WVN6 248 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 SLC25A38Q96DW6 304 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 SPAG8Q99932 426 aaPredicted RBP10.14□□□□□ -0.79
CHD3-209ENST00000473376 QTRT1Q9BXR0 403 aaKnown RBP10.14□□□□□ -0.79
CHD3-209ENST00000473376 SLC5A7Q9GZV3 580 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 AUNIPQ9H7T9 357 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 HRASLSQ9HDD0 168 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 CCL28Q9NRJ3 127 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 SACSQ9NZJ4 4579 aa10.14□□□□□ -0.79
CHD3-209ENST00000473376 TRAV18A0A075B6X5 111 aa10.13□□□□□ -0.79
CHD3-209ENST00000473376 UBE2CO00762 179 aa10.13□□□□□ -0.79
CHD3-209ENST00000473376 PLET1Q6UQ28 207 aa10.13□□□□□ -0.79
CHD3-209ENST00000473376 RBPMS2Q6ZRY4 209 aaKnown RBP10.13□□□□□ -0.79
CHD3-209ENST00000473376 SLC38A6Q8IZM9 456 aa10.13□□□□□ -0.79
CHD3-209ENST00000473376 GDPD1Q8N9F7 314 aa10.13□□□□□ -0.79
CHD3-209ENST00000473376 BSCL2Q96G97 398 aaPredicted RBP10.13□□□□□ -0.79
CHD3-209ENST00000473376 FAM212BQ9NTI7 297 aaPredicted RBP10.13□□□□□ -0.79
CHD3-209ENST00000473376 STARD9Q9P2P6 4700 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 DNAH1Q9P2D7 4330 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 K7EMT4 169 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 TSPAN4O14817 238 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 XRCC3O43542 346 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 SERPINE2P07093 398 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 ZNF773Q6PK81 442 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 SSX9Q7RTT3 188 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 OR2C3Q8N628 320 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 KIR2DL5BQ8NHK3 375 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 OVOL2Q9BRP0 275 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 RETNQ9HD89 108 aa10.12□□□□□ -0.79
CHD3-209ENST00000473376 DAZ1Q9NQZ3 744 aaKnown RBP10.12□□□□□ -0.79
CHD3-209ENST00000473376 GAR1Q9NY12 217 aaKnown RBP10.12□□□□□ -0.79
CHD3-209ENST00000473376 SMIM30A4D0T7 59 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 MFSD2BA6NFX1 497 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 SULT1C2O00338 296 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 NDUFA4O00483 81 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 TGOLN2O43493 480 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 TRAPPC2P0DI81 140 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 TRAPPC2BP0DI82 140 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 F2RP25116 425 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 GNRHRP30968 328 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 BMI1P35226 326 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 APOC4P55056 127 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms