RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SIGLEC16A6NMB1 481 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 M0QYV0 167 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 OR7C2O60412 319 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 KRT75O95678 551 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 OPN1SWP03999 348 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 LINC00614P0C842 121 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 GZMHP20718 246 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 SLC6A1P30531 599 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 SULT1A1P50225 295 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 RAB14P61106 215 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 ATP5G2Q06055 141 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 ZNF239Q16600 458 aaKnown RBP1.73□□□□□ -2.13
XRN1-210ENST00000472697 FAM182AQ5T1J6 154 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 ZFP1Q6P2D0 407 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 DAZ4Q86SG3 579 aaKnown RBP1.73□□□□□ -2.13
XRN1-210ENST00000472697 SLC26A10Q8NG04 563 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 COQ8AQ8NI60 647 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 SEH1LQ96EE3 360 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 DHRS9Q9BPW9 319 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 TTTY13Q9BZ97 58 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 DAZ1Q9NQZ3 744 aaKnown RBP1.73□□□□□ -2.13
XRN1-210ENST00000472697 COMMD9Q9P000 198 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 NDUFAF1Q9Y375 327 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 AKAP13Q12802 2813 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 UBR4Q5T4S7 5183 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 PIEZO2Q9H5I5 2752 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 A0A096LNJ9 63 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 A6NED7 52 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 TCF21O43680 179 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 DEDDO75618 318 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 YIF1AO95070 293 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 ELK4P28324 431 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 GABRA3P34903 492 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 LOXL1Q08397 574 aaPredicted RBP1.73□□□□□ -2.13
XRN1-210ENST00000472697 LCE1EQ5T753 118 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 GLYATQ6IB77 296 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 SLC51BQ86UW2 128 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 UMODL1-AS1Q8N2C9 162 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 EXOC3-AS1Q8N2X6 119 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 LRRC25Q8N386 305 aaPredicted RBP1.73□□□□□ -2.13
XRN1-210ENST00000472697 OR52R1Q8NGF1 315 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 TEX47Q8TBZ9 253 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 CAMK2N2Q96S95 79 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 C8orf4Q9NR00 106 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 FAM49BQ9NUQ9 324 aa1.73□□□□□ -2.13
XRN1-210ENST00000472697 IGKV1D-43A0A0B4J1Z2 117 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 EXOC1LA0A1B0GW35 172 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 PGPA6NDG6 321 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 A8MWP4 228 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 C2orf74A8MZ97 194 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 PHYHO14832 338 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 BCL2L11O43521 198 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 MFSD11O43934 449 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 STX10O60499 249 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 FSTL3O95633 263 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 IGKV1D-33P01593 117 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 IGKV1-33P01594 117 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 PFN1P07737 140 aaKnown RBP1.72□□□□□ -2.13
XRN1-210ENST00000472697 CST2P09228 141 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 GTF2F2P13984 249 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 MPIP34949 423 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 KRTAP10-9P60411 292 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 GNG3P63215 75 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 BTN1A1Q13410 526 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 ACOT6Q3I5F7 207 aaPredicted RBP1.72□□□□□ -2.13
XRN1-210ENST00000472697 AKIRIN2Q53H80 203 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 TMEM42Q69YG0 159 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 ZFP2Q6ZN57 461 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 ZNF550Q7Z398 422 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 ZBTB8OSQ8IWT0 167 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 ZDHHC22Q8N966 263 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 ZFP62Q8NB50 900 aaPredicted RBP1.72□□□□□ -2.13
XRN1-210ENST00000472697 OR10G4Q8NGN3 311 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 OR8S1Q8NH09 359 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 GRPEL2Q8TAA5 225 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 ENKURQ8TC29 256 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 FAM172AQ8WUF8 416 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 TMBIM1Q969X1 311 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 SNF8Q96H20 258 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 OR2V2Q96R30 315 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 C1orf50Q9BV19 199 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 TBL1XR1Q9BZK7 514 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 TRIM4Q9C037 500 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 C16orf95Q9H693 158 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 ZNF286AQ9HBT8 521 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 TP73-AS1Q9UF72 201 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 CYSLTR1Q9Y271 337 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 ZZEF1O43149 2961 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 CITO14578 2027 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 SPTBN1Q01082 2364 aaKnown RBP1.72□□□□□ -2.13
XRN1-210ENST00000472697 XIRP2A4UGR9 3374 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 SMIM23A6NLE4 172 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 TCAPO15273 167 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 DCTN3O75935 186 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 LY6G6DO95868 133 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 HBZP02008 142 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 KCNE1P15382 129 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 CCR2P41597 374 aa1.72□□□□□ -2.13
XRN1-210ENST00000472697 ARF6P62330 175 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms