RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 LGALS9BQ3B8N2 356 aa13.82□□□□□ -0.2
SORT1-203ENST00000471996 OR2B11Q5JQS5 317 aa13.82□□□□□ -0.2
SORT1-203ENST00000471996 Q6ZTC4 211 aa13.82□□□□□ -0.2
SORT1-203ENST00000471996 PACRGLQ8N7B6 248 aa13.82□□□□□ -0.2
SORT1-203ENST00000471996 Q8NAQ8 132 aa13.82□□□□□ -0.2
SORT1-203ENST00000471996 RNF126Q9BV68 326 aa13.82□□□□□ -0.2
SORT1-203ENST00000471996 P0DMU3 169 aa13.81□□□□□ -0.2
SORT1-203ENST00000471996 FAM231AP0DMU4 169 aa13.81□□□□□ -0.2
SORT1-203ENST00000471996 FAM231CP0DMU5 169 aa13.81□□□□□ -0.2
SORT1-203ENST00000471996 HSD17B12Q53GQ0 312 aa13.81□□□□□ -0.2
SORT1-203ENST00000471996 MS4A15Q8N5U1 240 aa13.81□□□□□ -0.2
SORT1-203ENST00000471996 ZNF645Q8N7E2 425 aa13.81□□□□□ -0.2
SORT1-203ENST00000471996 MAFIPQ8WZ33 124 aa13.81□□□□□ -0.2
SORT1-203ENST00000471996 THYN1Q9P016 225 aa13.81□□□□□ -0.2
SORT1-203ENST00000471996 CGB1A6NKQ9 187 aa13.8□□□□□ -0.2
SORT1-203ENST00000471996 K7EMT4 169 aa13.8□□□□□ -0.2
SORT1-203ENST00000471996 NDUFA4O00483 81 aa13.8□□□□□ -0.2
SORT1-203ENST00000471996 SLC17A2O00624 439 aa13.8□□□□□ -0.2
SORT1-203ENST00000471996 RBMY1A1P0DJD3 496 aaKnown RBP13.8□□□□□ -0.2
SORT1-203ENST00000471996 RBMY1CP0DJD4 496 aa13.8□□□□□ -0.2
SORT1-203ENST00000471996 CRHBPP24387 322 aa13.8□□□□□ -0.2
SORT1-203ENST00000471996 RPL8P62917 257 aaKnown RBP13.8□□□□□ -0.2
SORT1-203ENST00000471996 RBMY1FQ15415 496 aaKnown RBP13.8□□□□□ -0.2
SORT1-203ENST00000471996 OR4S2Q8NH73 311 aa13.8□□□□□ -0.2
SORT1-203ENST00000471996 C20orf24Q9BUV8 137 aa13.8□□□□□ -0.2
SORT1-203ENST00000471996 PLGRKTQ9HBL7 147 aa13.8□□□□□ -0.2
SORT1-203ENST00000471996 ETV7Q9Y603 341 aa13.8□□□□□ -0.2
SORT1-203ENST00000471996 OR2T8A6NH00 312 aa13.79□□□□□ -0.2
SORT1-203ENST00000471996 MYL12BO14950 172 aa13.79□□□□□ -0.2
SORT1-203ENST00000471996 MRPS14O60783 128 aaKnown RBP13.79□□□□□ -0.2
SORT1-203ENST00000471996 SSX1Q16384 188 aa13.79□□□□□ -0.2
SORT1-203ENST00000471996 VN1R17PQ8TDU5 208 aa13.79□□□□□ -0.2
SORT1-203ENST00000471996 BSCL2Q96G97 398 aaPredicted RBP13.79□□□□□ -0.2
SORT1-203ENST00000471996 RNF2Q99496 336 aa13.79□□□□□ -0.2
SORT1-203ENST00000471996 GFI1Q99684 422 aa13.79□□□□□ -0.2
SORT1-203ENST00000471996 CENPOQ9BU64 300 aa13.79□□□□□ -0.2
SORT1-203ENST00000471996 RBMX2Q9Y388 322 aaKnown RBP13.79□□□□□ -0.2
SORT1-203ENST00000471996 IGHV3OR16-8A0A075B7F1 116 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 IGHV4-28A0A0C4DH34 117 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 C15orf61A6NNL5 157 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 J3QRK9 145 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 RAB27BO00194 218 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 ZNF207O43670 478 aaKnown RBP13.78□□□□□ -0.2
SORT1-203ENST00000471996 AMBPP02760 352 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 CD36P16671 472 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 HLA-GP17693 338 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 TFPI2P48307 235 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 RAB3CQ96E17 227 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 SMPXQ9UHP9 88 aa13.78□□□□□ -0.2
SORT1-203ENST00000471996 IGLV2-14P01704 120 aa13.77□□□□□ -0.21
SORT1-203ENST00000471996 UCHL1P09936 223 aa13.77□□□□□ -0.21
SORT1-203ENST00000471996 BRWD1-AS2P59051 145 aa13.77□□□□□ -0.21
SORT1-203ENST00000471996 OR2B8PP59922 312 aa13.77□□□□□ -0.21
SORT1-203ENST00000471996 RAB11BQ15907 218 aa13.77□□□□□ -0.21
SORT1-203ENST00000471996 CENPSQ8N2Z9 138 aa13.77□□□□□ -0.21
SORT1-203ENST00000471996 DHRSXQ8N5I4 330 aa13.77□□□□□ -0.21
SORT1-203ENST00000471996 NANOGP1Q8N7R0 232 aa13.77□□□□□ -0.21
SORT1-203ENST00000471996 MAPKAPK5-AS1Q8N8E1 139 aa13.77□□□□□ -0.21
SORT1-203ENST00000471996 CHRDL1Q9BU40 450 aa13.77□□□□□ -0.21
SORT1-203ENST00000471996 IGLC7A0M8Q6 106 aa13.76□□□□□ -0.21
SORT1-203ENST00000471996 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
SORT1-203ENST00000471996 DENRO43583 198 aaKnown RBP13.76□□□□□ -0.21
SORT1-203ENST00000471996 CDK2AP2O75956 126 aa13.76□□□□□ -0.21
SORT1-203ENST00000471996 SLC22A5O76082 557 aa13.76□□□□□ -0.21
SORT1-203ENST00000471996 HRASP01112 189 aa13.76□□□□□ -0.21
SORT1-203ENST00000471996 C2orf76Q3KRA6 126 aa13.76□□□□□ -0.21
SORT1-203ENST00000471996 SPSB3Q6PJ21 355 aa13.76□□□□□ -0.21
SORT1-203ENST00000471996 Q6ZS49 121 aa13.76□□□□□ -0.21
SORT1-203ENST00000471996 TCTEX1D2Q8WW35 142 aa13.76□□□□□ -0.21
SORT1-203ENST00000471996 HSD17B10Q99714 261 aaKnown RBP13.76□□□□□ -0.21
SORT1-203ENST00000471996 RHPN1-AS1Q9BWJ2 59 aa13.76□□□□□ -0.21
SORT1-203ENST00000471996 IGKV3-7A0A075B6H7 116 aa13.75□□□□□ -0.21
SORT1-203ENST00000471996 IGKV1D-8A0A087WSZ0 117 aa13.75□□□□□ -0.21
SORT1-203ENST00000471996 CHEK1O14757 476 aa13.75□□□□□ -0.21
SORT1-203ENST00000471996 HLA-DQB1P01920 261 aa13.75□□□□□ -0.21
SORT1-203ENST00000471996 MIFP14174 115 aa13.75□□□□□ -0.21
SORT1-203ENST00000471996 CLDN12P56749 244 aa13.75□□□□□ -0.21
SORT1-203ENST00000471996 CYGBQ8WWM9 190 aa13.75□□□□□ -0.21
SORT1-203ENST00000471996 FAM3DQ96BQ1 224 aa13.75□□□□□ -0.21
SORT1-203ENST00000471996 SRSF8Q9BRL6 282 aaKnown RBP13.75□□□□□ -0.21
SORT1-203ENST00000471996 BET1LQ9NYM9 111 aa13.75□□□□□ -0.21
SORT1-203ENST00000471996 AK6Q9Y3D8 172 aaKnown RBP13.75□□□□□ -0.21
SORT1-203ENST00000471996 OR2W1Q9Y3N9 320 aa13.75□□□□□ -0.21
SORT1-203ENST00000471996 IGHV7-4-1A0A0J9YVY3 117 aa13.74□□□□□ -0.21
SORT1-203ENST00000471996 GNB3P16520 340 aa13.74□□□□□ -0.21
SORT1-203ENST00000471996 PLA2G7Q13093 441 aa13.74□□□□□ -0.21
SORT1-203ENST00000471996 EIF4EBP1Q13541 118 aaPredicted RBP13.74□□□□□ -0.21
SORT1-203ENST00000471996 RCN1Q15293 331 aa13.74□□□□□ -0.21
SORT1-203ENST00000471996 Q6ZR54 194 aa13.74□□□□□ -0.21
SORT1-203ENST00000471996 ATP6V0BQ99437 205 aa13.74□□□□□ -0.21
SORT1-203ENST00000471996 SPATA2Q9UM82 520 aa13.74□□□□□ -0.21
SORT1-203ENST00000471996 APOBP04114 4563 aaKnown RBP13.74□□□□□ -0.21
SORT1-203ENST00000471996 ELOA3CA0A087WX78 387 aaPredicted RBP13.73□□□□□ -0.21
SORT1-203ENST00000471996 DEFB131BA0A096LNP1 70 aa13.73□□□□□ -0.21
SORT1-203ENST00000471996 MFNGO00587 321 aa13.73□□□□□ -0.21
SORT1-203ENST00000471996 CASQ2O14958 399 aaPredicted RBP13.73□□□□□ -0.21
SORT1-203ENST00000471996 CYB5BO43169 146 aa13.73□□□□□ -0.21
SORT1-203ENST00000471996 NFYAP23511 347 aaPredicted RBP13.73□□□□□ -0.21
SORT1-203ENST00000471996 TIMM50Q3ZCQ8 353 aa13.73□□□□□ -0.21
SORT1-203ENST00000471996 FAM90A2PQ658T7 463 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms