RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 HIST1H1BP16401 226 aaKnown RBP17.03■□□□□ 0.32
C9orf3-213ENST00000471978 EDN2P20800 178 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 ARL3P36405 182 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 ZNF818PQ6ZRF7 136 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 GPHB5Q86YW7 130 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 GIMAP1Q8WWP7 306 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 EEF1AKMT3Q96AZ1 226 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 SLC2A8Q9NY64 477 aa17.03■□□□□ 0.32
C9orf3-213ENST00000471978 STARD9Q9P2P6 4700 aa17.02■□□□□ 0.32
C9orf3-213ENST00000471978 CGB1A6NKQ9 187 aa17.02■□□□□ 0.32
C9orf3-213ENST00000471978 TPPPO94811 219 aa17.02■□□□□ 0.32
C9orf3-213ENST00000471978 HPRT1P00492 218 aa17.02■□□□□ 0.32
C9orf3-213ENST00000471978 IFNA6P05013 189 aa17.02■□□□□ 0.32
C9orf3-213ENST00000471978 TAS2R31P59538 309 aa17.02■□□□□ 0.32
C9orf3-213ENST00000471978 KLK9Q2XQG4 91 aa17.02■□□□□ 0.32
C9orf3-213ENST00000471978 TMEM17Q86X19 198 aa17.02■□□□□ 0.32
C9orf3-213ENST00000471978 IFT46Q9NQC8 304 aa17.02■□□□□ 0.32
C9orf3-213ENST00000471978 TECRQ9NZ01 308 aaKnown RBP17.02■□□□□ 0.32
C9orf3-213ENST00000471978 KLK9Q9UKQ9 250 aa17.02■□□□□ 0.32
C9orf3-213ENST00000471978 XRCC3O43542 346 aa17.01■□□□□ 0.31
C9orf3-213ENST00000471978 CD7P09564 240 aa17.01■□□□□ 0.31
C9orf3-213ENST00000471978 NQO2P16083 231 aa17.01■□□□□ 0.31
C9orf3-213ENST00000471978 OR2B8PP59922 312 aa17.01■□□□□ 0.31
C9orf3-213ENST00000471978 GUCA2BQ16661 112 aa17.01■□□□□ 0.31
C9orf3-213ENST00000471978 CROCCP3Q8IVE0 287 aa17.01■□□□□ 0.31
C9orf3-213ENST00000471978 OR51H1Q8NH63 302 aa17.01■□□□□ 0.31
C9orf3-213ENST00000471978 S100A16Q96FQ6 103 aaKnown RBP17.01■□□□□ 0.31
C9orf3-213ENST00000471978 CEPT1Q9Y6K0 416 aa17.01■□□□□ 0.31
C9orf3-213ENST00000471978 IGLV11-55A0A075B6I3 123 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 TRAV3A0A0B4J244 114 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 ZNF320A2RRD8 509 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 UPK2O00526 184 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 TGFBR1P36897 503 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 HERV-K104P61576 105 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 POU2AF1Q16633 256 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 FAM106AQ4KMX7 169 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 AADACL3Q5VUY0 350 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 LINC00322Q6ZN03 302 aaPredicted RBP17■□□□□ 0.31
C9orf3-213ENST00000471978 ZC4H2Q9NQZ6 224 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 LYSTQ99698 3801 aa17■□□□□ 0.31
C9orf3-213ENST00000471978 CBLN1P23435 193 aa16.99■□□□□ 0.31
C9orf3-213ENST00000471978 UBE2NLQ5JXB2 153 aa16.99■□□□□ 0.31
C9orf3-213ENST00000471978 DEFB125Q8N687 156 aa16.99■□□□□ 0.31
C9orf3-213ENST00000471978 DMBX1Q8NFW5 382 aa16.99■□□□□ 0.31
C9orf3-213ENST00000471978 CD300LFQ8TDQ1 290 aa16.99■□□□□ 0.31
C9orf3-213ENST00000471978 CACNG8Q8WXS5 425 aa16.99■□□□□ 0.31
C9orf3-213ENST00000471978 WDR89Q96FK6 387 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-213ENST00000471978 COMMD5Q9GZQ3 224 aa16.99■□□□□ 0.31
C9orf3-213ENST00000471978 PLEKHA2Q9HB19 425 aa16.99■□□□□ 0.31
C9orf3-213ENST00000471978 EHFQ9NZC4 300 aa16.99■□□□□ 0.31
C9orf3-213ENST00000471978 TRBV7-1A0A0A6YYK4 115 aa16.98■□□□□ 0.31
C9orf3-213ENST00000471978 MFSD2BA6NFX1 497 aa16.98■□□□□ 0.31
C9orf3-213ENST00000471978 S1PR2O95136 353 aa16.98■□□□□ 0.31
C9orf3-213ENST00000471978 CLEC3BP05452 202 aa16.98■□□□□ 0.31
C9orf3-213ENST00000471978 GNRHRP30968 328 aa16.98■□□□□ 0.31
C9orf3-213ENST00000471978 BORCS5Q969J3 196 aa16.98■□□□□ 0.31
C9orf3-213ENST00000471978 CXorf58Q96LI9 332 aa16.98■□□□□ 0.31
C9orf3-213ENST00000471978 RETNQ9HD89 108 aa16.98■□□□□ 0.31
C9orf3-213ENST00000471978 TMEM140Q9NV12 185 aa16.98■□□□□ 0.31
C9orf3-213ENST00000471978 GAR1Q9NY12 217 aaKnown RBP16.98■□□□□ 0.31
C9orf3-213ENST00000471978 SELENOKQ9Y6D0 94 aa16.98■□□□□ 0.31
C9orf3-213ENST00000471978 IGLC7A0M8Q6 106 aa16.97■□□□□ 0.31
C9orf3-213ENST00000471978 OR11H12B2RN74 326 aa16.97■□□□□ 0.31
C9orf3-213ENST00000471978 RPS19P39019 145 aaKnown RBP16.97■□□□□ 0.31
C9orf3-213ENST00000471978 RFX2P48378 723 aa16.97■□□□□ 0.31
C9orf3-213ENST00000471978 TMEM69Q5SWH9 247 aa16.97■□□□□ 0.31
C9orf3-213ENST00000471978 DHRS11Q6UWP2 260 aa16.97■□□□□ 0.31
C9orf3-213ENST00000471978 SAMD12Q8N8I0 201 aa16.97■□□□□ 0.31
C9orf3-213ENST00000471978 WFDC10AQ9H1F0 79 aa16.97■□□□□ 0.31
C9orf3-213ENST00000471978 HIPK2Q9H2X6 1198 aa16.97■□□□□ 0.31
C9orf3-213ENST00000471978 TMEM213A2RRL7 107 aa16.96■□□□□ 0.31
C9orf3-213ENST00000471978 RBMY1BA6NDE4 496 aaKnown RBP16.96■□□□□ 0.31
C9orf3-213ENST00000471978 RBMY1EA6NEQ0 496 aaKnown RBP16.96■□□□□ 0.31
C9orf3-213ENST00000471978 A8MWP6 167 aa16.96■□□□□ 0.31
C9orf3-213ENST00000471978 RBMY1DP0C7P1 496 aaKnown RBP16.96■□□□□ 0.31
C9orf3-213ENST00000471978 RPA2P15927 270 aa16.96■□□□□ 0.31
C9orf3-213ENST00000471978 LSM3P62310 102 aaKnown RBP16.96■□□□□ 0.31
C9orf3-213ENST00000471978 ZNF57Q68EA5 555 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-213ENST00000471978 SRSF8Q9BRL6 282 aaKnown RBP16.96■□□□□ 0.31
C9orf3-213ENST00000471978 ZNF2Q9BSG1 426 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-213ENST00000471978 QTRT1Q9BXR0 403 aaKnown RBP16.96■□□□□ 0.31
C9orf3-213ENST00000471978 SRD5A3Q9H8P0 318 aa16.96■□□□□ 0.31
C9orf3-213ENST00000471978 COMMD9Q9P000 198 aa16.96■□□□□ 0.31
C9orf3-213ENST00000471978 LCE6AA0A183 80 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 PMP2P02689 132 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 RLN1P04808 185 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 FGF2P09038 288 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 TAS2R20P59543 309 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 UXS1Q8NBZ7 420 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 OR10W1Q8NGF6 305 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 MOB3AQ96BX8 217 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 YIPF6Q96EC8 236 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 THYN1Q9P016 225 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 MLXQ9UH92 298 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 ANAPC10Q9UM13 185 aa16.95■□□□□ 0.3
C9orf3-213ENST00000471978 PGLYRP1O75594 196 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-213ENST00000471978 GPR183P32249 361 aa16.94■□□□□ 0.3
C9orf3-213ENST00000471978 TAS2R46P59540 309 aa16.94■□□□□ 0.3
C9orf3-213ENST00000471978 ERVK-16P61578 105 aa16.94■□□□□ 0.3
C9orf3-213ENST00000471978 TM4SF20Q53R12 229 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms