RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 LINC01548A6NM66 108 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 C15orf61A6NNL5 157 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 ST8SIA3O43173 380 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 HILS1P60008 231 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 SRSF2Q01130 221 aaKnown RBP15.21■□□□□ 0.03
PSPC1-203ENST00000471658 TNXAQ16473 311 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 C16orf82Q7Z2V1 217 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 MMD2Q8IY49 270 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 OR4D5Q8NGN0 318 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 PDCD10Q9BUL8 212 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.21■□□□□ 0.03
PSPC1-203ENST00000471658 TMEM14BQ9NUH8 114 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 OR51B2Q9Y5P1 312 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 TNCP24821 2201 aa15.21■□□□□ 0.03
PSPC1-203ENST00000471658 TEX50A0A1B0GTY4 177 aa15.21■□□□□ 0.02
PSPC1-203ENST00000471658 SLC25A6P12236 298 aa15.21■□□□□ 0.02
PSPC1-203ENST00000471658 CX3CL1P78423 397 aa15.21■□□□□ 0.02
PSPC1-203ENST00000471658 C9orf152Q5JTZ5 239 aa15.21■□□□□ 0.02
PSPC1-203ENST00000471658 C11orf87Q6NUJ2 197 aa15.21■□□□□ 0.02
PSPC1-203ENST00000471658 SPIN2AQ99865 258 aa15.21■□□□□ 0.02
PSPC1-203ENST00000471658 SPIN2BQ9BPZ2 258 aa15.21■□□□□ 0.02
PSPC1-203ENST00000471658 ZNF436Q9C0F3 470 aaPredicted RBP15.21■□□□□ 0.02
PSPC1-203ENST00000471658 PRNDQ9UKY0 176 aa15.21■□□□□ 0.02
PSPC1-203ENST00000471658 IGHV7-81A0A0B4J1V7 117 aa15.2■□□□□ 0.02
PSPC1-203ENST00000471658 A0A1B0GW64 132 aa15.2■□□□□ 0.02
PSPC1-203ENST00000471658 NDPQ00604 133 aa15.2■□□□□ 0.02
PSPC1-203ENST00000471658 CD83Q01151 205 aa15.2■□□□□ 0.02
PSPC1-203ENST00000471658 IL15RAQ13261 267 aa15.2■□□□□ 0.02
PSPC1-203ENST00000471658 FOXRED2Q8IWF2 684 aa15.2■□□□□ 0.02
PSPC1-203ENST00000471658 COA4Q9NYJ1 87 aa15.2■□□□□ 0.02
PSPC1-203ENST00000471658 FOXA2Q9Y261 457 aaPredicted RBP15.2■□□□□ 0.02
PSPC1-203ENST00000471658 CGB1A6NKQ9 187 aa15.19■□□□□ 0.02
PSPC1-203ENST00000471658 SCGB1D2O95969 90 aa15.19■□□□□ 0.02
PSPC1-203ENST00000471658 HLA-DRB1P01911 266 aa15.19■□□□□ 0.02
PSPC1-203ENST00000471658 UBA52P62987 128 aaKnown RBP15.19■□□□□ 0.02
PSPC1-203ENST00000471658 FXYD3Q14802 87 aa15.19■□□□□ 0.02
PSPC1-203ENST00000471658 FAM103A1Q9BTL3 118 aaKnown RBP15.19■□□□□ 0.02
PSPC1-203ENST00000471658 MAGT1Q9H0U3 335 aa15.19■□□□□ 0.02
PSPC1-203ENST00000471658 TET2Q6N021 2002 aaPredicted RBP15.19■□□□□ 0.02
PSPC1-203ENST00000471658 FAM181BA6NEQ2 426 aa15.18■□□□□ 0.02
PSPC1-203ENST00000471658 CLDN34H7C241 214 aa15.18■□□□□ 0.02
PSPC1-203ENST00000471658 M0QZK8 103 aa15.18■□□□□ 0.02
PSPC1-203ENST00000471658 CNIH1O95406 144 aa15.18■□□□□ 0.02
PSPC1-203ENST00000471658 COMPP49747 757 aaPredicted RBP15.18■□□□□ 0.02
PSPC1-203ENST00000471658 AARDQ4LEZ3 155 aa15.18■□□□□ 0.02
PSPC1-203ENST00000471658 ZNF562Q6V9R5 426 aa15.18■□□□□ 0.02
PSPC1-203ENST00000471658 ZNF429Q86V71 674 aa15.18■□□□□ 0.02
PSPC1-203ENST00000471658 HINT2Q9BX68 163 aa15.18■□□□□ 0.02
PSPC1-203ENST00000471658 COMMD5Q9GZQ3 224 aa15.18■□□□□ 0.02
PSPC1-203ENST00000471658 FBXO7Q9Y3I1 522 aa15.18■□□□□ 0.02
PSPC1-203ENST00000471658 ACTL6BO94805 426 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 IFNA17P01571 189 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 MBPP02686 304 aaPredicted RBP15.17■□□□□ 0.02
PSPC1-203ENST00000471658 APELAP0DMC3 54 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 EGR2P11161 476 aaPredicted RBP15.17■□□□□ 0.02
PSPC1-203ENST00000471658 RPL27AP46776 148 aaKnown RBP15.17■□□□□ 0.02
PSPC1-203ENST00000471658 HSPE1P61604 102 aaKnown RBP15.17■□□□□ 0.02
PSPC1-203ENST00000471658 ID3Q02535 119 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 SRSF4Q08170 494 aaKnown RBP15.17■□□□□ 0.02
PSPC1-203ENST00000471658 FYTTD1Q96QD9 318 aaKnown RBP15.17■□□□□ 0.02
PSPC1-203ENST00000471658 MAS1LP35410 378 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 POLR2GP62487 172 aaKnown RBP eCLIP15.17■□□□□ 0.02
PSPC1-203ENST00000471658 TNFRSF9Q07011 255 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 RAB32Q13637 225 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 LRRC37A5PQ49AS3 106 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 Q5BKY6 102 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 OR10W1Q8NGF6 305 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 GRPEL2Q8TAA5 225 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 SRSF12Q8WXF0 261 aaKnown RBP15.17■□□□□ 0.02
PSPC1-203ENST00000471658 NMES1Q9C002 83 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 RBKSQ9H477 322 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 RANGRFQ9HD47 186 aaPredicted RBP15.17■□□□□ 0.02
PSPC1-203ENST00000471658 NDUFA4L2Q9NRX3 87 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 FKBP11Q9NYL4 201 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 HSPB7Q9UBY9 170 aa15.17■□□□□ 0.02
PSPC1-203ENST00000471658 MSGN1A6NI15 193 aa15.16■□□□□ 0.02
PSPC1-203ENST00000471658 TCF21O43680 179 aa15.16■□□□□ 0.02
PSPC1-203ENST00000471658 RNASE1P07998 156 aaKnown RBP15.16■□□□□ 0.02
PSPC1-203ENST00000471658 TRAPPC2P0DI81 140 aa15.16■□□□□ 0.02
PSPC1-203ENST00000471658 TRAPPC2BP0DI82 140 aa15.16■□□□□ 0.02
PSPC1-203ENST00000471658 NKX2-1P43699 371 aaPredicted RBP15.16■□□□□ 0.02
PSPC1-203ENST00000471658 CD300CQ08708 224 aa15.16■□□□□ 0.02
PSPC1-203ENST00000471658 OR1L8Q8NGR8 309 aa15.16■□□□□ 0.02
PSPC1-203ENST00000471658 LINC00527Q9UJ94 153 aa15.16■□□□□ 0.02
PSPC1-203ENST00000471658 LSM5Q9Y4Y9 91 aaKnown RBP15.16■□□□□ 0.02
PSPC1-203ENST00000471658 SMLR1H3BR10 107 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 GIPP09681 153 aaPredicted RBP15.15■□□□□ 0.02
PSPC1-203ENST00000471658 SPCS3P61009 180 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 OR5B3Q8NH48 314 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 OR52E5Q8NH55 327 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 ABHD5Q8WTS1 349 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 PPP1R1CQ8WVI7 109 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 ARPC1AQ92747 370 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 ST6GAL2Q96JF0 529 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 ZNF702PQ9H963 129 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 PARP11Q9NR21 331 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 ZNF257Q9Y2Q1 563 aa15.15■□□□□ 0.02
PSPC1-203ENST00000471658 NIPBLQ6KC79 2804 aaeCLIP15.15■□□□□ 0.021e-5■□□□□ 11.1
PSPC1-203ENST00000471658 CEBPZOSA8MTT3 80 aa15.14■□□□□ 0.01
PSPC1-203ENST00000471658 TEX22C9J3V5 150 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms