RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 ONECUT1Q9UBC0 465 aa14.16□□□□□ -0.14
HSPG2-208ENST00000471322 NUP50Q9UKX7 468 aa14.16□□□□□ -0.14
HSPG2-208ENST00000471322 PRNDQ9UKY0 176 aa14.16□□□□□ -0.14
HSPG2-208ENST00000471322 C2CD3Q4AC94 2353 aa14.16□□□□□ -0.14
HSPG2-208ENST00000471322 NAV3Q8IVL0 2385 aa14.16□□□□□ -0.14
HSPG2-208ENST00000471322 WNK2Q9Y3S1 2297 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 ANKRD34BA5PLL1 514 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 H7C2Y5 167 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 IGLV1-47P01700 117 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 BLOC1S1P78537 153 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 TMEM267Q0VDI3 215 aaPredicted RBP14.15□□□□□ -0.14
HSPG2-208ENST00000471322 TMEM177Q53S58 311 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 IL17RELQ6ZVW7 336 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 VKORC1L1Q8N0U8 176 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 FLYWCH2Q96CP2 140 aaKnown RBP14.15□□□□□ -0.14
HSPG2-208ENST00000471322 FKBP11Q9NYL4 201 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 FOXA2Q9Y261 457 aaPredicted RBP14.15□□□□□ -0.14
HSPG2-208ENST00000471322 C15orf61A6NNL5 157 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 ZNF705EA8MWA4 302 aaPredicted RBP14.15□□□□□ -0.14
HSPG2-208ENST00000471322 NUDT19A8MXV4 375 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 B4DSR2 109 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 SHOXO15266 292 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 IL6RP08887 468 aaPredicted RBP14.15□□□□□ -0.14
HSPG2-208ENST00000471322 METTL15P1P0C7V9 234 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 ATP6V1FQ16864 119 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 HLA-DRB5Q30154 266 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 KIR3DL3Q8N743 410 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 OR4C13Q8NGP0 309 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 HIPK2Q9H2X6 1198 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 HIF1ANQ9NWT6 349 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 BET1LQ9NYM9 111 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 WASHC3Q9Y3C0 194 aa14.15□□□□□ -0.14
HSPG2-208ENST00000471322 MFSD2BA6NFX1 497 aa14.14□□□□□ -0.15
HSPG2-208ENST00000471322 MSMBP08118 114 aa14.14□□□□□ -0.15
HSPG2-208ENST00000471322 ZFP36P26651 326 aaKnown RBP14.14□□□□□ -0.15
HSPG2-208ENST00000471322 OR2B8PP59922 312 aa14.14□□□□□ -0.15
HSPG2-208ENST00000471322 HSPE1P61604 102 aaKnown RBP14.14□□□□□ -0.15
HSPG2-208ENST00000471322 HSD17B13Q7Z5P4 300 aaPredicted RBP14.14□□□□□ -0.15
HSPG2-208ENST00000471322 EIF4E3Q8N5X7 224 aaKnown RBP14.14□□□□□ -0.15
HSPG2-208ENST00000471322 HSD17B11Q8NBQ5 300 aa14.14□□□□□ -0.15
HSPG2-208ENST00000471322 TMEM14BQ9NUH8 114 aa14.14□□□□□ -0.15
HSPG2-208ENST00000471322 BUB1B-PAK6H3BSN5 160 aa14.13□□□□□ -0.15
HSPG2-208ENST00000471322 UPK2O00526 184 aa14.13□□□□□ -0.15
HSPG2-208ENST00000471322 IGKV1-16P04430 117 aa14.13□□□□□ -0.15
HSPG2-208ENST00000471322 AANATQ16613 207 aa14.13□□□□□ -0.15
HSPG2-208ENST00000471322 SLC25A24Q6NUK1 477 aa14.13□□□□□ -0.15
HSPG2-208ENST00000471322 OR4A5Q8NH83 315 aa14.13□□□□□ -0.15
HSPG2-208ENST00000471322 VSTM2AQ8TAG5 236 aa14.13□□□□□ -0.15
HSPG2-208ENST00000471322 SCGB1C1Q8TD33 95 aa14.13□□□□□ -0.15
HSPG2-208ENST00000471322 PINX1Q96BK5 328 aaKnown RBP14.13□□□□□ -0.15
HSPG2-208ENST00000471322 ZNF257Q9Y2Q1 563 aa14.13□□□□□ -0.15
HSPG2-208ENST00000471322 UMAD1C9J7I0 102 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 ENSAO43768 121 aaKnown RBP14.12□□□□□ -0.15
HSPG2-208ENST00000471322 FGF2P09038 288 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 PRTN3P24158 256 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 REG1BP48304 166 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 PUSL1Q8N0Z8 303 aaKnown RBP14.12□□□□□ -0.15
HSPG2-208ENST00000471322 LILRB2Q8N423 598 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 OR11H6Q8NGC7 330 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 OR10P1Q8NGE3 313 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 ZDHHC16Q969W1 377 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 C1orf159Q96HA4 380 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 HARBI1Q96MB7 349 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 PARD6GQ9BYG4 376 aaPredicted RBP14.12□□□□□ -0.15
HSPG2-208ENST00000471322 PARP11Q9NR21 331 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 TCF19Q9Y242 345 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 TRAV3A0A0B4J244 114 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 TRIM77I1YAP6 450 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 ATP6V0CP27449 155 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 LGALS7P47929 136 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 ARF6P62330 175 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 SLC38A11Q08AI6 406 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 Q8N7P7 452 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 MARC2Q969Z3 335 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 OR4C12Q96R67 309 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 ENY2Q9NPA8 101 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 HEYLQ9NQ87 328 aaPredicted RBP14.12□□□□□ -0.15
HSPG2-208ENST00000471322 INSIG2Q9Y5U4 225 aa14.12□□□□□ -0.15
HSPG2-208ENST00000471322 SRRM4A7MD48 611 aaKnown RBP14.11□□□□□ -0.15
HSPG2-208ENST00000471322 KBTBD11O94819 623 aa14.11□□□□□ -0.15
HSPG2-208ENST00000471322 ARG1P05089 322 aa14.11□□□□□ -0.15
HSPG2-208ENST00000471322 OR8U8P0C7N1 319 aa14.11□□□□□ -0.15
HSPG2-208ENST00000471322 COX7A1P24310 79 aa14.11□□□□□ -0.15
HSPG2-208ENST00000471322 VDAC2P45880 294 aaPredicted RBP14.11□□□□□ -0.15
HSPG2-208ENST00000471322 RPS16P62249 146 aaKnown RBP14.11□□□□□ -0.15
HSPG2-208ENST00000471322 ARL16Q0P5N6 197 aa14.11□□□□□ -0.15
HSPG2-208ENST00000471322 PNKDQ8N490 385 aa14.11□□□□□ -0.15
HSPG2-208ENST00000471322 OR2G3Q8NGZ4 309 aa14.11□□□□□ -0.15
HSPG2-208ENST00000471322 MMP26Q9NRE1 261 aa14.11□□□□□ -0.15
HSPG2-208ENST00000471322 OR51B2Q9Y5P1 312 aa14.11□□□□□ -0.15
HSPG2-208ENST00000471322 KPTNQ9Y664 436 aa14.11□□□□□ -0.15
HSPG2-208ENST00000471322 RAB19A4D1S5 217 aa14.1□□□□□ -0.15
HSPG2-208ENST00000471322 A8MXK9 166 aa14.1□□□□□ -0.15
HSPG2-208ENST00000471322 SAA1P0DJI8 122 aaPredicted RBP14.1□□□□□ -0.15
HSPG2-208ENST00000471322 HOXA1P49639 335 aaPredicted RBP14.1□□□□□ -0.15
HSPG2-208ENST00000471322 ATP5IP56385 69 aaPredicted RBP14.1□□□□□ -0.15
HSPG2-208ENST00000471322 DIAPH2-AS1Q14236 149 aa14.1□□□□□ -0.15
HSPG2-208ENST00000471322 FAM120AOSQ5T036 256 aa14.1□□□□□ -0.15
HSPG2-208ENST00000471322 OR8G2PQ6IF36 304 aa14.1□□□□□ -0.15
HSPG2-208ENST00000471322 HAPLN4Q86UW8 402 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms