RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 H7C2Y5 167 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 UPK2O00526 184 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 KCNAB3O43448 404 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 RBMXL2O75526 392 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 CFDP00746 253 aaPredicted RBP4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 ARG1P05089 322 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 IL6RP08887 468 aaPredicted RBP4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 FGF2P09038 288 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 OR9G9P0C7N8 305 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 COX7A1P24310 79 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 CAV2P51636 162 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 DVL1P1P54792 670 aaPredicted RBP4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 PAX9P55771 341 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 RAB14P61106 215 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 RPS16P62249 146 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 LCN2P80188 198 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 EWSR1Q01844 656 aaKnown RBP eCLIP4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 ZNF266Q14584 549 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 KHDC1LQ5JSQ8 128 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 TPTE2P1Q5T6R2 138 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 MINOS1Q5TGZ0 78 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 IGFL4Q6B9Z1 124 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 SSX9Q7RTT3 188 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 STX12Q86Y82 276 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 BAP18Q8IXM2 172 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 OR8H3Q8N146 312 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 OR4P4Q8NGL7 312 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 LRRC20Q8TCA0 184 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 RPEQ96AT9 228 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 QTRT1Q9BXR0 403 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 MAGT1Q9H0U3 335 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 SIRPDQ9H106 197 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 SLC25A32Q9H2D1 315 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 RBKSQ9H477 322 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 CYTL1Q9NRR1 136 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 ZNRD1Q9P1U0 126 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 FOXA2Q9Y261 457 aaPredicted RBP4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 ZNF257Q9Y2Q1 563 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 MINOS1-NBL1R4GNA1 71 aa4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 PRRC2CQ9Y520 2896 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-204ENST00000471297 IGHV1-3A0A0C4DH29 117 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 IGSF23A1L1A6 192 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 ODF3BA8MYP8 253 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 DFFBO76075 338 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 KBTBD11O94819 623 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 NXPH3O95157 252 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 SPDEFO95238 335 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 IFNA17P01571 189 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 IGKV1-16P04430 117 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 USF1P22415 310 aaPredicted RBP4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 CD1BP29016 333 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 SULT1A1P50225 295 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 UBE2E1P51965 193 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 HSPE1P61604 102 aaKnown RBP4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 PAX8Q06710 450 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 ATP6V1FQ16864 119 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 CLEC12BQ2HXU8 276 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 VMA21Q3ZAQ7 101 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 CLLU1Q5K131 121 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 OR4A47Q6IF82 309 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 HCP5Q6MZN7 132 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 CCDC144NLQ6NUI1 221 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 VMO1Q7Z5L0 202 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 MOB3BQ86TA1 216 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 PUSL1Q8N0Z8 303 aaKnown RBP4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 Q8N1X5 172 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 STPG2Q8N412 459 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 TEX45Q8NA69 505 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 UBAC2Q8NBM4 344 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 OR1S2Q8NGQ3 325 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 DTD1Q8TEA8 209 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 PERPQ96FX8 193 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 HARBI1Q96MB7 349 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 TSNAXQ99598 290 aaKnown RBP4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 HIPK2Q9H2X6 1198 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 LPAR2Q9HBW0 351 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 ENY2Q9NPA8 101 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 SIRT7Q9NRC8 400 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 TMEM14BQ9NUH8 114 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 FBXL17Q9UF56 701 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 NUP50Q9UKX7 468 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 STRAPQ9Y3F4 350 aaKnown RBP4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 TBL2Q9Y4P3 447 aaKnown RBP4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 LAMA5O15230 3695 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 DSCAML1Q8TD84 2053 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 ROS1P08922 2347 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 NBASA2RRP1 2371 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 USP24Q9UPU5 2620 aa4.9□□□□□ -1.63
SMNDC1-204ENST00000471297 DSPP15924 2871 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 IGHV4-30-2A0A087WSY4 118 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 IGHV4-61A0A0C4DH41 118 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 C15orf61A6NNL5 157 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 SRRM4A7MD48 611 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 ZNF785A8K8V0 405 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 FAM157AC9JC47 383 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 TMEM50AO95807 157 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 IFNA5P01569 189 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 SEC11BP0C7V7 166 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 SAA1P0DJI8 122 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms